RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 UBQLN3Q9H347 655 aa16.12■□□□□ 0.17
SMAD3-210ENST00000559092 METTL7AQ9H8H3 244 aa16.12■□□□□ 0.17
SMAD3-210ENST00000559092 LRTM1Q9HBL6 345 aa16.12■□□□□ 0.17
SMAD3-210ENST00000559092 EML4Q9HC35 981 aaKnown RBP16.12■□□□□ 0.17
SMAD3-210ENST00000559092 C1orf109Q9NX04 203 aa16.12■□□□□ 0.17
SMAD3-210ENST00000559092 TAS2R9Q9NYW1 312 aa16.12■□□□□ 0.17
SMAD3-210ENST00000559092 PLOD2O00469 737 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 HPNP05981 417 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 IFI6P09912 130 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 CT45A8P0DMV1 189 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 CT45A9P0DMV2 189 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 NEFHP12036 1026 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 ENDOUP21128 410 aaKnown RBP16.11■□□□□ 0.17
SMAD3-210ENST00000559092 ALDH3A1P30838 453 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 SERPINB5P36952 375 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 MASP1P48740 699 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 CDK9P50750 372 aaKnown RBP16.11■□□□□ 0.17
SMAD3-210ENST00000559092 NNATQ16517 81 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 CT45A2Q5DJT8 189 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 FNDC7Q5VTL7 733 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 BICRALQ6AI39 1079 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 B3GNT6Q6ZMB0 384 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 MCEMP1Q8IX19 187 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 MREGQ8N565 214 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 TMCO6Q96DC7 493 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 COL21A1Q96P44 957 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 GNRHR2Q96P88 292 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 FAM111AQ96PZ2 611 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 TTYH2Q9BSA4 534 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 SENP1Q9P0U3 644 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 SPRR3Q9UBC9 169 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 EXO1Q9UQ84 846 aaKnown RBP16.11■□□□□ 0.17
SMAD3-210ENST00000559092 RNF6Q9Y252 685 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 C15orf41Q9Y2V0 281 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 POLR3HQ9Y535 204 aaPredicted RBP16.11■□□□□ 0.17
SMAD3-210ENST00000559092 ADGRG4Q8IZF6 3080 aa16.11■□□□□ 0.17
SMAD3-210ENST00000559092 PCNX1Q96RV3 2341 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 ICOSLGO75144 302 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 COQ9O75208 318 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 UGT2B11O75310 529 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 ERN1O75460 977 aaKnown RBP16.1■□□□□ 0.17
SMAD3-210ENST00000559092 TRAPPC6AO75865 159 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 NTSP30990 170 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 NCBP2P52298 156 aaKnown RBP eCLIP16.1■□□□□ 0.17
SMAD3-210ENST00000559092 NUP107P57740 925 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 EFR3AQ14156 821 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 KANK2Q63ZY3 851 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 Q6ZSR9 355 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 CLYBLQ8N0X4 340 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 RPRMLQ8N4K4 120 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 ACBD4Q8NC06 268 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 OR7G2Q8NG99 324 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 CDC26Q8NHZ8 85 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 TCP10LQ8TDR4 215 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 SLC35A4Q96G79 324 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 ZNF764Q96H86 408 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-210ENST00000559092 FCRL1Q96LA6 429 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 SLC6A15Q9H2J7 730 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 TNFRSF10DQ9UBN6 386 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 C19orf53Q9UNZ5 99 aaPredicted RBP16.1■□□□□ 0.17
SMAD3-210ENST00000559092 TMED5Q9Y3A6 229 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 TRAF6Q9Y4K3 522 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 FAM215AQ9Y5M1 114 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 DNAJC15Q9Y5T4 150 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 GTF3C1Q12789 2109 aa16.1■□□□□ 0.17
SMAD3-210ENST00000559092 AHRRA9YTQ3 701 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 REM1O75628 298 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 GLI4P10075 376 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 PRF1P14222 555 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 KIR3DL1P43629 444 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 MRPS22P82650 360 aaKnown RBP16.09■□□□□ 0.17
SMAD3-210ENST00000559092 SF3B4Q15427 424 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMAD3-210ENST00000559092 PRSS53Q2L4Q9 553 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 ARL13AQ5H913 290 aaPredicted RBP16.09■□□□□ 0.17
SMAD3-210ENST00000559092 NHSL2Q5HYW2 709 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 C1orf185Q5T7R7 199 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 RTL6Q6ICC9 239 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 OR1J4Q8NGS1 313 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 TMBIM1Q969X1 311 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 AMDHD1Q96NU7 426 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 NODALQ96S42 347 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 CCT7Q99832 543 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 ENKD1Q9H0I2 346 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 TUBB1Q9H4B7 451 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 ANKRA2Q9H9E1 313 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 FOLH1BQ9HBA9 442 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 KCNJ16Q9NPI9 418 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 SLC17A7Q9P2U7 560 aa16.09■□□□□ 0.17
SMAD3-210ENST00000559092 NCOA6Q14686 2063 aaPredicted RBP16.09■□□□□ 0.17
SMAD3-210ENST00000559092 LRBAP50851 2863 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 C15orf38-AP3S2A0A0A6YYH1 394 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 PRAMEF25A6NGN4 478 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 C19orf84I3L1E1 186 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 SNPHO15079 494 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 TSPAN2O60636 221 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 TBX19O60806 448 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 SPAG7O75391 227 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 CBR3O75828 277 aa16.08■□□□□ 0.16
SMAD3-210ENST00000559092 JUNP05412 331 aaKnown RBP16.08■□□□□ 0.16
SMAD3-210ENST00000559092 TUBBP07437 444 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms