RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 F7P08709 466 aaPredicted RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 ZNF23P17027 643 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 SRD5A2P31213 254 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 YWHABP31946 246 aaKnown RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 EIF2S3P41091 472 aaKnown RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 APOBEC1P41238 236 aaKnown RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 CDC34P49427 236 aaPredicted RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 UBE2G2P60604 165 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 NHLH1Q02575 133 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 PNRC1Q12796 327 aaPredicted RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 PLA2G7Q13093 441 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 GANABQ14697 944 aaKnown RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 HEPACAMQ14CZ8 416 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 EXOSC7Q15024 291 aaKnown RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 KYAT1Q16773 422 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 TMEM31Q5JXX7 168 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 LGSNQ5TDP6 509 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 TWF2Q6IBS0 349 aaKnown RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 FAM109BQ6ICB4 259 aaPredicted RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 OR4F3Q6IEY1 312 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 SLC26A9Q7LBE3 791 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 SERPINA9Q86WD7 417 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 GCSAMQ8N6F7 178 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 OR2L3Q8NG85 312 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 OR7G2Q8NG99 324 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 OR5AU1Q8NGC0 362 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 OR4L1Q8NH43 312 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 ASB5Q8WWX0 329 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 ING5Q8WYH8 240 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 FAM3CQ92520 227 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 ERGIC1Q969X5 290 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 MTERF3Q96E29 417 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 PLEKHA8Q96JA3 519 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 DEFB118Q96PH6 123 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 SELENOSQ9BQE4 189 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 BTBD10Q9BSF8 475 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 TUBGCP2Q9BSJ2 902 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 IL1RL2Q9HB29 575 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 MYOZ2Q9NPC6 264 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 ADA2Q9NZK5 511 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 NPAP1Q9NZP6 1156 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 PLEKHB1Q9UF11 243 aaPredicted RBP3.83□□□□□ -1.8
USP44-208ENST00000552440 POFUT2Q9Y2G5 429 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 GSTK1Q9Y2Q3 226 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 MROH7-TTC4A0A0A0MT08 1334 aa3.83□□□□□ -1.8
USP44-208ENST00000552440 MTMR11A4FU01 709 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 OR5K4A6NMS3 321 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 DLGAP1O14490 977 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 TRAFD1O14545 582 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 GPR171O14626 319 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 ARPC1BO15143 372 aaKnown RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 HSPA12AO43301 675 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 SYT7O43581 403 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 SLC28A2O43868 658 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 SNX3O60493 162 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 GRAP2O75791 330 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 RAF1P04049 648 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CYP2D6P10635 497 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 IRF2P14316 349 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 NDUFB7P17568 137 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CD58P19256 250 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 MMP12P39900 470 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 GLIPR1P48060 266 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CASP4P49662 377 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 GPX6P59796 221 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 POLR2GP62487 172 aaKnown RBP eCLIP3.82□□□□□ -1.8
USP44-208ENST00000552440 SP3Q02447 781 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 STX3Q13277 289 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 ART3Q13508 389 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 EIF2S3LQ2VIR3 472 aaKnown RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 ARMCX4Q5H9R4 360 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CLVS2Q5SYC1 327 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 H3F3CQ6NXT2 135 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 DOK6Q6PKX4 331 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 DCDC5Q6ZRR9 648 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 H2BFWTQ7Z2G1 175 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CPEB2Q7Z5Q1 589 aaKnown RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 ZNF444Q8N0Y2 327 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 LSMEM2Q8N112 164 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 BEST3Q8N1M1 668 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CHDHQ8NE62 594 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 DDHD1Q8NEL9 900 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 OR9G4Q8NGQ1 327 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 PPP4R1Q8TF05 950 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 SMPDL3BQ92485 455 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 DAZLQ92904 295 aaKnown RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 P2RY11Q96G91 374 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 AKR1E2Q96JD6 320 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 CXorf58Q96LI9 332 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 AMDHD1Q96NU7 426 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 RIT2Q99578 217 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 PARD6BQ9BYG5 372 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 LRMDAQ9H2I8 198 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 HIPK2Q9H2X6 1198 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 R3HDMLQ9H3Y0 253 aa3.82□□□□□ -1.8
USP44-208ENST00000552440 SAV1Q9H4B6 383 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 FAM124BQ9H5Z6 455 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 KAT8Q9H7Z6 458 aaKnown RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 DMAP1Q9NPF5 467 aaPredicted RBP3.82□□□□□ -1.8
USP44-208ENST00000552440 NOX4Q9NPH5 578 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms