RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ZNF681Q96N22 645 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 DGAT2Q96PD7 388 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 TSSK3Q96PN8 268 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 GPATCH1Q9BRR8 931 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 SIKE1Q9BRV8 207 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 DEFB127Q9H1M4 99 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 SLC24A3Q9HC58 644 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 MIEF1Q9NQG6 463 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 PNO1Q9NRX1 252 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 GIMAP2Q9UG22 337 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 UTS2RQ9UKP6 389 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 MAPRE3Q9UPY8 281 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 EXO1Q9UQ84 846 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 KLF13Q9Y2Y9 288 aaPredicted RBP8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 CLCA3PQ9Y6N3 262 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 ZNF780BQ9Y6R6 833 aa8.04□□□□□ -1.12
CLSTN3-212ENST00000541770 NPIPA2E9PIF3 369 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 NPIPA3F8WFD2 350 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 DYRK3O43781 588 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 OR10H2O60403 315 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ERAL1O75616 437 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ATP1B1P05026 303 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CPMP14384 443 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CSNK2A2P19784 350 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 EPHA3P29320 983 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ALDH9A1P49189 494 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 GPR143P51810 404 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 XKP51811 444 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CLDN8P56748 225 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 GUCY1A3Q02108 690 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ID2Q02363 134 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 PDE7AQ13946 482 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 SPRED3Q2MJR0 410 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 SLC9B1Q4ZJI4 515 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 R3HCC1LQ7Z5L2 792 aaKnown RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 SULF2Q8IWU5 870 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 NATD1Q8N6N6 113 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 POGLUT1Q8NBL1 392 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 APCDD1LQ8NCL9 501 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 MORN4Q8NDC4 146 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 B3GNT7Q8NFL0 401 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 OR52N2Q8NGI0 321 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 OR5M9Q8NGP3 310 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 OR14A16Q8NHC5 309 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CEP70Q8NHQ1 597 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 GOT1L1Q8NHS2 421 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CDC26Q8NHZ8 85 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ELP5Q8TE02 316 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 KLHL29Q96CT2 875 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CNRIP1Q96F85 164 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ART5Q96L15 291 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 SMR3AQ99954 134 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CCDC28BQ9BUN5 200 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 C1orf50Q9BV19 199 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CLEC4MQ9H2X3 399 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 REEP4Q9H6H4 257 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 WDR55Q9H6Y2 383 aaPredicted RBP8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 CXorf21Q9HAI6 301 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 SLC35C2Q9NQQ7 365 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 GIMAP4Q9NUV9 329 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 BAIAP2L1Q9UHR4 511 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 ATP6V1HQ9UI12 483 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
CLSTN3-212ENST00000541770 GOLGA8QA0A0J9YX86 632 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 MYOCOSA0A1B0GUC4 107 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 GOLGA8OA6NCC3 632 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 A8MUA0 341 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 MYO1GB0I1T2 1018 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 C17orf105B2RV13 164 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 GOLGA8NF8WBI6 632 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 FCHO1O14526 889 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 SCAMP2O15127 329 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 PEX1O43933 1283 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 CTAG2O75638 210 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 SLITRK5O94991 958 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 IFI6P09912 130 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 ALDOCP09972 364 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 G6PDP11413 515 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 TNNI3P19429 210 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 PRPS1L1P21108 318 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 ADSLP30566 484 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 MPIP34949 423 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 HPCAL1P37235 193 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 FEN1P39748 380 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 FRKP42685 505 aaPredicted RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 ZFP36L2P47974 494 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 IDH3AP50213 366 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 CLCN2P51788 898 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 NR0B1P51843 470 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 AQP5P55064 265 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 DIO3P55073 304 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 ADAM8P78325 824 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 PLGLB1Q02325 96 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 MAP4K2Q12851 820 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 PTGR1Q14914 329 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 GSTA3Q16772 222 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 LSM12Q3MHD2 195 aaKnown RBP8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 CMPK2Q5EBM0 449 aa8.02□□□□□ -1.13
CLSTN3-212ENST00000541770 ZNF585AQ6P3V2 769 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms