RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 RCN2Q14257 317 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 SHROOM1Q2M3G4 852 aaPredicted RBP2.78□□□□□ -1.96
CCDC7-208ENST00000537047 RHBDD2Q6NTF9 364 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 KCTD9Q7L273 389 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 SYVN1Q86TM6 617 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 TMCO5AQ8N6Q1 288 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 GDAP1Q8TB36 358 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 MARC2Q969Z3 335 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 FAM46BQ96A09 425 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 NTMT1Q9BV86 223 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 DCTPP1Q9H773 170 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 MAGEF1Q9HAY2 307 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 VPS54Q9P1Q0 977 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 DPM3Q9P2X0 92 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 DIMT1Q9UNQ2 313 aaKnown RBP2.78□□□□□ -1.96
CCDC7-208ENST00000537047 LIPT1Q9Y234 373 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 RNF115Q9Y4L5 304 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 FLVCR1Q9Y5Y0 555 aa2.78□□□□□ -1.96
CCDC7-208ENST00000537047 FGD5Q6ZNL6 1462 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 ZNF263O14978 683 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 CFLARO15519 480 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 TXNDC12O95881 172 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 CT45A10P0DMU9 189 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 CYP3A5P20815 502 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 ACP1P24666 158 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 ACADSBP45954 432 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 TKTL1P51854 596 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 DCAF4L1Q3SXM0 396 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 TAF3Q5VWG9 929 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 MFSD7Q6UXD7 560 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 STOX1Q6ZVD7 989 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 GPR142Q7Z601 462 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 SIDT2Q8NBJ9 832 aaKnown RBP2.77□□□□□ -1.97
CCDC7-208ENST00000537047 TFB1MQ8WVM0 346 aaKnown RBP2.77□□□□□ -1.97
CCDC7-208ENST00000537047 CAPNS2Q96L46 248 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 JAKMIP1Q96N16 626 aaKnown RBP2.77□□□□□ -1.97
CCDC7-208ENST00000537047 FAM173AQ9BQD7 235 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 CACNG6Q9BXT2 260 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 TRIM9Q9C026 710 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 DCLRE1BQ9H816 532 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 DDX28Q9NUL7 540 aaKnown RBP2.77□□□□□ -1.97
CCDC7-208ENST00000537047 ACOXLQ9NUZ1 547 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 ERVK-18Q9QC07 812 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 TUBGCP4Q9UGJ1 667 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 SLC2A6Q9UGQ3 507 aa2.77□□□□□ -1.97
CCDC7-208ENST00000537047 LTBP1Q14766 1721 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 IGKV2D-24A0A075B6R9 120 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 A0A0A6YYC8 382 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-208ENST00000537047 ANKRD63C9JTQ0 380 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 I3L1I5 382 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-208ENST00000537047 CYB561D2O14569 222 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 ATP6V1G1O75348 118 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 UROSP10746 265 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 VCLP18206 1134 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 AXLP30530 894 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 OR1D4P47884 311 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 KLF5Q13887 457 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-208ENST00000537047 ZNF528Q3MIS6 628 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 TCHHL1Q5QJ38 904 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-208ENST00000537047 PRAMEF8Q5VWM4 474 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 CDC42EP5Q6NZY7 148 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 MOB1BQ7L9L4 216 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 STHQ8IWL8 128 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 H1FOOQ8IZA3 346 aaPredicted RBP2.76□□□□□ -1.97
CCDC7-208ENST00000537047 FIBINQ8TAL6 211 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 GPR174Q9BXC1 333 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 ZCCHC3Q9NUD5 404 aaKnown RBP2.76□□□□□ -1.97
CCDC7-208ENST00000537047 CNIH4Q9P003 139 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 EMCNQ9ULC0 261 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 STX8Q9UNK0 236 aa2.76□□□□□ -1.97
CCDC7-208ENST00000537047 KIF7Q2M1P5 1343 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 ARHGAP21Q5T5U3 1957 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 SLC17A2O00624 439 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 EI24O14681 340 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 SH2D1BO14796 132 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 GSTA1P08263 222 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 SERPINF2P08697 491 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 GHRP10912 638 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 TNNT3P45378 269 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-208ENST00000537047 UCP2P55851 309 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 HERV-K104P63124 156 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 GLYR1Q49A26 553 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-208ENST00000537047 PSMA8Q8TAA3 256 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 C9orf85Q96MD7 179 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 ELOVL4Q9GZR5 314 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 MAD2L2Q9UI95 211 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 FBXW2Q9UKT8 454 aa2.75□□□□□ -1.97
CCDC7-208ENST00000537047 FOXA2Q9Y261 457 aaPredicted RBP2.75□□□□□ -1.97
CCDC7-208ENST00000537047 A0A0A6YYD4 124 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 NPIPA5A0A0B4J1W7 369 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 A0A0U1RQG5 324 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-208ENST00000537047 NPIPA5E9PKD4 350 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 CHEK1O14757 476 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 SNAI2O43623 268 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 LCMT2O60294 686 aaKnown RBP2.74□□□□□ -1.97
CCDC7-208ENST00000537047 PDE5AO76074 875 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 CENPBP07199 599 aaPredicted RBP2.74□□□□□ -1.97
CCDC7-208ENST00000537047 ALDH3B2P48448 385 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 SMSP52788 366 aa2.74□□□□□ -1.97
CCDC7-208ENST00000537047 RPS4XP62701 263 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms