RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 UGT2B28Q9BY64 529 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 ZNF395Q9H8N7 513 aaPredicted RBP8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 RNPEPL1Q9HAU8 725 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 THAP1Q9NVV9 213 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 CNIH4Q9P003 139 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 TXNDC16Q9P2K2 825 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 DCDC2Q9UHG0 476 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 HAO1Q9UJM8 370 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 MID2Q9UJV3 735 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 PTBP2Q9UKA9 531 aaKnown RBP8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 TRIM33Q9UPN9 1127 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 ERVK-19Q9WJR5 959 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 STK38LQ9Y2H1 464 aa8.4□□□□□ -1.06
CHMP4A-205ENST00000531158 ANKRD33BA6NCL7 494 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CD8B2A6NJW9 211 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 PLPP1O14494 284 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 PHGDHO43175 533 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 PEX11AO75192 247 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 STK16O75716 305 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 TGFB1P01137 390 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 ALDOAP04075 364 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 SERPINE1P05121 402 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 MYL2P10916 166 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CD1DP15813 335 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 ALOX15P16050 662 aaPredicted RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 BMP7P18075 431 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CPN2P22792 545 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 SERPINB3P29508 390 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 SSTR4P31391 388 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 SERPINB8P50452 374 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CDK9P50750 372 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 NAGLUP54802 743 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 NKX6-1P78426 367 aaPredicted RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 TNFRSF17Q02223 184 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CHIT1Q13231 466 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 PCBP2Q15366 365 aaKnown RBP eCLIP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CHI3L2Q15782 390 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 CCDC153Q494R4 210 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 EIPR1Q53HC9 387 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 NHSL2Q5HYW2 709 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 MROH9Q5TGP6 573 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 KHDRBS2Q5VWX1 349 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 LAS2Q8IYD9 372 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 SNX31Q8N9S9 440 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 PDPRQ8NCN5 879 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 OR7G3Q8NG95 312 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 GABPB2Q8TAK5 448 aaPredicted RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 DIO2Q92813 273 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 THOC1Q96FV9 657 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 NSL1Q96IY1 281 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 RSRC1Q96IZ7 334 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 VPS39Q96JC1 886 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 ZNF597Q96LX8 424 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 RILPQ96NA2 401 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 GNRHR2Q96P88 292 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 DGAT2Q96PD7 388 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 TRIB1Q96RU8 372 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 RBBP8Q99708 897 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 BTBD10Q9BSF8 475 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 DERL2Q9GZP9 239 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 OR51B5Q9H339 312 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 C12orf65Q9H3J6 166 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 RPF2Q9H7B2 306 aaKnown RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 POPDC3Q9HBV1 291 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 GALNT8Q9NY28 637 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 WWOXQ9NZC7 414 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 HEY2Q9UBP5 337 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 FOXD3Q9UJU5 478 aaPredicted RBP8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 DCTN4Q9UJW0 460 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 EDARQ9UNE0 448 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 DTX4Q9Y2E6 619 aa8.39□□□□□ -1.07
CHMP4A-205ENST00000531158 A0A1W2PR48 441 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 GLOD5A6NK44 160 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 B4DXG7 233 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 EEF1E1-BLOC1S5C9J1V9 151 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 INAFM1C9JVW0 142 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 CLGNO14967 610 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 EEF1E1O43324 174 aaKnown RBP8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 TMPRSS11DO60235 418 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 PLIN3O60664 434 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 EEDO75530 441 aaKnown RBP8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 IL2RAP01589 272 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 CT62P0C5K7 136 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 COX7A2P14406 83 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 CTSSP25774 331 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 PTPN6P29350 595 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 CASP3P42574 277 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 SSR2P43308 183 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 PLIN5Q00G26 463 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 DLG1Q12959 904 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 STX3Q13277 289 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 SLAMF1Q13291 335 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 RCN2Q14257 317 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 ZNF267Q14586 743 aaPredicted RBP8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 RPS6KA2Q15349 733 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 DNAL1Q4LDG9 190 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 WIPI1Q5MNZ9 446 aaPredicted RBP8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 Q5PR19 223 aa8.38□□□□□ -1.07
CHMP4A-205ENST00000531158 OR4C11Q6IEV9 310 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms