RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GPIP06744 558 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 KLK3P07288 261 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 PLEKP08567 350 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ZSCAN5DPP0CG00 497 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TRIM49P0CI25 452 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TRIM49CP0CI26 452 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CCL4P13236 92 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CTSEP14091 401 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 NELFEP18615 380 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 XRCC1P18887 633 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ITIH1P19827 911 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 UGT1A4P22310 534 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 LMO2P25791 158 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CASP14P31944 242 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CEACAM8P31997 349 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 CD70P32970 193 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 RORAP35398 523 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 LONP1P36776 959 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 DLSTP36957 453 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CCT6AP40227 531 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ACADSBP45954 432 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SLC6A12P48065 614 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PSMD8P48556 350 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SERPINH1P50454 418 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 IST1P53990 364 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 B3GALT5-AS1P59052 145 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TAS2R40P59535 323 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 OSTNP61366 133 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 YWHAGP61981 247 aaKnown RBP eCLIP1.38□□□□□ -2.19
CD44-212ENST00000524922 YWHAEP62258 255 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 TRA2BP62995 288 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 KCNJ10P78508 379 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 MRPS34P82930 218 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 HMGN5P82970 282 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 BST2Q10589 180 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 NCF4Q15080 339 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 GPR68Q15743 365 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 DEFB113Q30KQ7 82 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SLC25A35Q3KQZ1 300 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PDLIM3Q53GG5 364 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 LRRC73Q5JTD7 316 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 NDUFAF5Q5TEU4 345 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 AGAP7PQ5VUJ5 663 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SDHAF4Q5VUM1 108 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SPECC1LQ69YQ0 1117 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CDC73Q6P1J9 531 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 BLOC1S2Q6QNY1 142 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 Q6ZRP5 223 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 STRADAQ7RTN6 431 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SLC16A9Q7RTY1 509 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 ACOT1Q86TX2 421 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 MEX3DQ86XN8 651 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ZNF354CQ86Y25 554 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 HIPK1Q86Z02 1210 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PHC2Q8IXK0 858 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 LMNTD2Q8IXW0 634 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 DIS3L2Q8IYB7 885 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 STK40Q8N2I9 435 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CSGALNACT2Q8N6G5 542 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 C1orf52Q8N6N3 182 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 EMC1Q8N766 993 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 C4orf32Q8N8J7 132 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 L3MBTL4Q8NA19 623 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 FDCSPQ8NFU4 85 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 OR2Y1Q8NGV0 311 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 LILRB4Q8NHJ6 448 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SLC2A14Q8TDB8 520 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TRPC4APQ8TEL6 797 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 GANCQ8TET4 914 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PIBF1Q8WXW3 757 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 POMGNT1Q8WZA1 660 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 ARHGEF2Q92974 986 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ART4Q93070 314 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 ECHDC3Q96DC8 303 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 RMND5BQ96G75 393 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 FAM81BQ96LP2 452 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 C9orf72Q96LT7 481 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 HARBI1Q96MB7 349 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TMEM68Q96MH6 324 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 AGAP4Q96P64 663 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 RANBP9Q96S59 729 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SERINC2Q96SA4 455 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PRMT1Q99873 361 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 C19orf43Q9BQ61 176 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 NUDT9Q9BW91 350 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 ULBP3Q9BZM4 244 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 MTMR12Q9C0I1 747 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CUEDC2Q9H467 287 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 ACTL8Q9H568 366 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TRIM45Q9H8W5 580 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 NMUR1Q9HB89 426 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 FGF21Q9NSA1 209 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 DDX19AQ9NUU7 478 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 SEPT11Q9NVA2 429 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ARHGEF38Q9NXL2 777 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PTTG2Q9NZH5 202 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 RCOR3Q9P2K3 495 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 B4GALT7Q9UBV7 327 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 IL36AQ9UHA7 158 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SLC12A6Q9UHW9 1150 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms