RNA–Protein interactions for RNA: ENST00000524039.5

GSDMB-215, Transcript of gasdermin B, humanhuman

TSL 2

Gene GSDMB, Length 1,100 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-215ENST00000524039 GOLGA8TH3BQL2 631 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 BIRC5O15392 142 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 OR10H2O60403 315 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 CTNSO60931 367 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 LDB3O75112 727 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ETHE1O95571 254 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ESR1P03372 595 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 SNRPAP09012 282 aaKnown RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 FBXO45P0C2W1 286 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 DANCRP0C864 163 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 NEFHP12036 1026 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 CHMP24386 653 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 AHRP35869 848 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 VHLP40337 213 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 STARP49675 285 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 NAB1Q13506 487 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 RBBP5Q15291 538 aaKnown RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 KBTBD12Q3ZCT8 623 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 C6orf163Q5TEZ5 329 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 FNDC7Q5VTL7 733 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 FAM166AQ6J272 317 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ABHD17CQ6PCB6 329 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 CLEC2AQ6UVW9 174 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 SBSNQ6UWP8 590 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ENPP6Q6UWR7 440 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 CYHR1Q6ZMK1 362 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 C9orf40Q8IXQ3 194 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 DND1Q8IYX4 353 aaKnown RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 DEPDC4Q8N2C3 294 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 MPP5Q8N3R9 675 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ZNF610Q8N9Z0 462 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 TRPV3Q8NET8 790 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ABHD11Q8NFV4 315 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 OR4K1Q8NGD4 311 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 LILRB1Q8NHL6 650 aaPredicted RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 NUBPLQ8TB37 319 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 LPGAT1Q92604 370 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 NEUROG1Q92886 237 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 PEX13Q92968 403 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 PTCD3Q96EY7 689 aaKnown RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 ZNF845Q96IR2 970 aaPredicted RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 UCN2Q96RP3 112 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 GAL3ST4Q96RP7 486 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 CSF3RQ99062 836 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 TMEM204Q9BSN7 226 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 HAUS8Q9BT25 410 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 G6PC3Q9BUM1 346 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 CCDC28BQ9BUN5 200 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 NPLQ9BXD5 320 aaPredicted RBP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 NPHS2Q9NP85 383 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.96□□□□□ -1.3
GSDMB-215ENST00000524039 TRIM33Q9UPN9 1127 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 DTX4Q9Y2E6 619 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 LRCH1Q9Y2L9 728 aa6.96□□□□□ -1.3
GSDMB-215ENST00000524039 LOC100289279A0A1B0GTE1 492 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TCRBV9S1A1TA0A576 114 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 ANKRD33BA6NCL7 494 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 A6NHS1 94 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 PLOD2O00469 737 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 COPEO14579 308 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TP53I11O14683 189 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 PFDN6O15212 129 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 GYG2O15488 501 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 CLOCKO15516 846 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 B3GALT2O43825 422 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 SNX4O95219 450 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 VAPBO95292 243 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 CRHP06850 196 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 THBS1P07996 1170 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 ETS1P14921 441 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 PAMP19021 973 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TPSB2P20231 275 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 SSTR1P30872 391 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 SERPINB4P48594 390 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 CLCN7P51798 805 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 RAP1GDS1P52306 607 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 NUDT6P53370 316 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 GDF10P55107 478 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 ACTG1P63261 375 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 CRADDP78560 199 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 BASP1P80723 227 aaKnown RBP6.95□□□□□ -1.3
GSDMB-215ENST00000524039 ID2Q02363 134 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 SF3A3Q12874 501 aaKnown RBP eCLIP6.95□□□□□ -1.33e-8■■■■■ 54.4
GSDMB-215ENST00000524039 CSHL1Q14406 222 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TPSAB1Q15661 275 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 NTRK2Q16620 822 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 GSTA3Q16772 222 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TRMT5Q32P41 509 aaKnown RBP6.95□□□□□ -1.3
GSDMB-215ENST00000524039 DNAL1Q4LDG9 190 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 PCID2Q5JVF3 399 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 ANKRD22Q5VYY1 191 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 OR2A2Q6IF42 318 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 MRNIPQ6NTE8 343 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TMEM64Q6YI46 380 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 TIFABQ6ZNK6 161 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 PIWIL4Q7Z3Z4 852 aaKnown RBP6.95□□□□□ -1.3
GSDMB-215ENST00000524039 STRA8Q7Z7C7 330 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 PRUNE1Q86TP1 453 aa6.95□□□□□ -1.3
GSDMB-215ENST00000524039 MTDHQ86UE4 582 aaKnown RBP6.95□□□□□ -1.3
GSDMB-215ENST00000524039 CILP2Q8IUL8 1156 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms