RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 KLHDC8AQ8IYD2 350 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 RASGEF1CQ8N431 466 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 RELL2Q8NC24 303 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 NAXEQ8NCW5 288 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CCT6BQ92526 530 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 C1orf43Q9BWL3 253 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 POLDIP3Q9BY77 421 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 TRIM54Q9BYV2 358 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 OR8D2Q9GZM6 311 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 RPH3AQ9Y2J0 694 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 ATG4BQ9Y4P1 393 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 PSAT1Q9Y617 370 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 H3BUI4 141 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 LDB3O75112 727 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 WDR47O94967 919 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ETHE1O95571 254 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 IFNA16P05015 189 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 JUNP05412 331 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 RFPL3SP0C7P2 107 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 PIGAP37287 484 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 MAN2A2P49641 1150 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 LIM2P55344 173 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 STXBP1P61764 594 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 BMPR2Q13873 1038 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 TSNQ15631 228 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 ADPRMQ3LIE5 342 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SPANXN3Q5MJ09 141 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 NDUFAF5Q5TEU4 345 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 RNF220Q5VTB9 566 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 FAM45BPQ6NSW5 357 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 TMIGD1Q6UXZ0 262 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ZNF793Q6ZN11 406 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 RTL4Q6ZR62 310 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 FAM47EQ6ZV65 393 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ZNF572Q7Z3I7 529 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 GALNT7Q86SF2 657 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CDC20BQ86Y33 519 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 GPALPP1Q8IXQ4 340 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ZNF595Q8IYB9 648 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CMTM4Q8IZR5 234 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 TMEM132CQ8N3T6 1108 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CHDHQ8NE62 594 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 TRIM58Q8NG06 486 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 FAM45AQ8TCE6 357 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SLC2A12Q8TD20 617 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ANKRD49Q8WVL7 239 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CFAP36Q96G28 342 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SLC35A4Q96G79 324 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 PDLIM5Q96HC4 596 aaKnown RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 FAR2Q96K12 515 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SMR3AQ99954 134 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SH3GL2Q99962 352 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 FAM173AQ9BQD7 235 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 TMEM79Q9BSE2 394 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 NPLQ9BXD5 320 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 ZNF703Q9H7S9 590 aaPredicted RBP6.1□□□□□ -1.43
COPS4-209ENST00000511653 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 IL1RL2Q9HB29 575 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 RASSF1Q9NS23 344 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 SACM1LQ9NTJ5 587 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ALKBH4Q9NXW9 302 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ACAD8Q9UKU7 415 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 DAPP1Q9UN19 280 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CHMP2BQ9UQN3 213 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 OARD1Q9Y530 152 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 KCNE2Q9Y6J6 123 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 CLCA3PQ9Y6N3 262 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 DSCAMO60469 2012 aa6.1□□□□□ -1.43
COPS4-209ENST00000511653 ANK2Q01484 3957 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 SVEP1Q4LDE5 3571 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 UBE2QL1A1L167 161 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 NCF1BA6NI72 391 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 LRRC3CA6NJW4 275 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 NCF1CA8MVU1 366 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 C17orf105B2RV13 164 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 RTCAO00442 366 aaKnown RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 CLDN4O14493 209 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 DNALI1O14645 258 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 WDR1O75083 606 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 LRATO95237 230 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 C1GALT1C1LP0DN25 315 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 NCF1P14598 390 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 GYPEP15421 78 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 CD22P20273 847 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 CNR1P21554 472 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 UQCRC1P31930 480 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 TAS2R39P59534 338 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 HYAL4Q2M3T9 481 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 SLC25A35Q3KQZ1 300 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 FLYWCH1Q4VC44 716 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 PRAMEF20Q5VT98 475 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 DGAT2L6Q6ZPD8 337 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 RGS9BPQ6ZS82 235 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 Q71RC1 249 aaPredicted RBP6.09□□□□□ -1.43
COPS4-209ENST00000511653 C1QL4Q86Z23 238 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 C9orf40Q8IXQ3 194 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 WFDC11Q8NEX6 87 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 OR2L5Q8NG80 312 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 OR14A16Q8NHC5 309 aa6.09□□□□□ -1.43
COPS4-209ENST00000511653 DOK4Q8TEW6 326 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms