RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 FAM199XQ6PEV8 388 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 GDPD4Q6W3E5 623 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM26Q6ZUK4 368 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 RNF44Q7L0R7 432 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DPPA4Q7L190 304 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PRSS42Q7Z5A4 293 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF589Q86UQ0 364 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PUSL1Q8N0Z8 303 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CISD2Q8N5K1 135 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 VGLL2Q8N8G2 317 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TMEM116Q8NCL8 245 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CATSPER1Q8NEC5 780 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CCDC54Q8NEL0 328 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PROKR2Q8NFJ6 384 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 OR5B17Q8NGF7 314 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 NAT14Q8WUY8 206 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DCAF4Q8WV16 495 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 OIT3Q8WWZ8 545 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DDB2Q92466 427 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PIGBQ92521 554 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 GTF2H4Q92759 462 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TCEAL3Q969E4 200 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SLC38A4Q969I6 547 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 FUBP1Q96AE4 644 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 EXOSC8Q96B26 276 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TESCQ96BS2 214 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CCDC124Q96CT7 223 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 R3HDM4Q96D70 268 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ASB9Q96DX5 294 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF486Q96H40 463 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 THOC3Q96J01 351 aaKnown RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 GLT1D1Q96MS3 346 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 WDFY2Q96P53 400 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 DUX5Q96PT3 197 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SEPT5Q99719 369 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 NIPSNAP1Q9BPW8 284 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 SLC30A2Q9BRI3 323 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PCGF1Q9BSM1 259 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ALOXE3Q9BYJ1 711 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PCBD2Q9H0N5 130 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 OR2AG1Q9H205 316 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MTG2Q9H4K7 406 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 APMAPQ9HDC9 416 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 MKKSQ9NPJ1 570 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PDGFCQ9NRA1 345 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 UPB1Q9UBR1 384 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PISDQ9UG56 409 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 NDRG3Q9UGV2 375 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 OPN4Q9UHM6 478 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 AJAP1Q9UKB5 411 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CLEC4EQ9ULY5 219 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 RASD1Q9Y272 281 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 TP53TG5Q9Y2B4 290 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 PRG3Q9Y2Y8 225 aaPredicted RBP4.24□□□□□ -1.73
NIPBL-206ENST00000509429 ASB1Q9Y576 335 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 USP54Q70EL1 1684 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 AGLP35573 1532 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 CRYBG1Q9Y4K1 1723 aa4.24□□□□□ -1.73
NIPBL-206ENST00000509429 WDR17Q8IZU2 1322 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 RPTORQ8N122 1335 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CHD2O14647 1828 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 TECPR2O15040 1411 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 A0A1W2PQL4 384 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 C2orf78A6NCI8 922 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SAC3D1A6NKF1 404 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 A6NL46 340 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 YDJCA8MPS7 323 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 EFCAB8A8MWE9 144 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 EVPLLA8MZ36 301 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ZNF487B1APH4 448 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NEDD8-MDP1E9PL57 170 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MKRN2OSH3BPM6 223 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SMLR1H3BR10 107 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NRP1O14786 923 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 OGG1O15527 345 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SSX4O60224 188 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 FCMRO60667 390 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CSO75390 466 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 NME6O75414 186 aaPredicted RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MOSPD3O75425 235 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 HAUS5O94927 633 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 WDR47O94967 919 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 GLP2RO95838 553 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MPIG6BO95866 241 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 GH1P01241 217 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 PPBPP02775 128 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CFIP05156 583 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 HEXAP06865 529 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 ALPIP09923 528 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 OCM2P0CE71 109 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 SNHG28P0DPA3 235 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 HSPD1P10809 573 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 FGF5P12034 268 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CD19P15391 556 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 CD1EP15812 388 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 KCNA3P22001 575 aa4.23□□□□□ -1.73
NIPBL-206ENST00000509429 UBA1P22314 1058 aaKnown RBP4.23□□□□□ -1.73
NIPBL-206ENST00000509429 MARCKSP29966 332 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms