RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 FAM83FQ8NEG4 500 aaPredicted RBP10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 IL17RDQ8NFM7 739 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 RLN3Q8WXF3 142 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 UCN3Q969E3 161 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 TM4SF18Q96CE8 201 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 FCRL4Q96PJ5 515 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 OR5M11Q96RB7 305 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 ASPNQ9BXN1 380 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 TPSD1Q9BZJ3 242 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 NT5DC2Q9H857 520 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 ZSCAN32Q9NX65 697 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 CA14Q9ULX7 337 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 STUB1Q9UNE7 303 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 HEBP2Q9Y5Z4 205 aa10.38□□□□□ -0.75
SH3RF1-203ENST00000508685 ARHGEF17Q96PE2 2063 aaPredicted RBP10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 FANCMQ8IYD8 2048 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SNTNA6NMZ2 147 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 C10orf142B7Z368 130 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 J3KTA2 159 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 TNFRSF10AO00220 468 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 BTN3A3O00478 584 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 TRAPPC2P0DI81 140 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 TRAPPC2BP0DI82 140 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 CHRNB1P11230 501 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 F3P13726 295 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 POU2F1P14859 743 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 TNFSF8P32971 234 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 DGKEP52429 567 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 HYAL2Q12891 473 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 MLLT11Q13015 90 aaPredicted RBP10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 TDGQ13569 410 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 GAS6Q14393 721 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 CD300LDQ6UXZ3 194 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF793Q6ZN11 406 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 APOBEC4Q8WW27 367 aaKnown RBP10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 RGMAQ96B86 450 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF486Q96H40 463 aaPredicted RBP10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF354BQ96LW1 612 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 OPALINQ96PE5 141 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SPATA5L1Q9BVQ7 753 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 GPR174Q9BXC1 333 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SYNDIG1Q9H7V2 258 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SMURF1Q9HCE7 757 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 POLMQ9NP87 494 aaPredicted RBP10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SLC2A4RGQ9NR83 387 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 QPCTLQ9NXS2 382 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 REV1Q9UBZ9 1251 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 KLF15Q9UIH9 416 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 PCOLCE2Q9UKZ9 415 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SSR3Q9UNL2 185 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 LSM2Q9Y333 95 aaKnown RBP10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 SNX11Q9Y5W9 270 aa10.37□□□□□ -0.75
SH3RF1-203ENST00000508685 IQCMA0A1B0GVH7 501 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 WASHC1A8K0Z3 465 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ZNF670-ZNF695F2Z2N8 137 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 TNFRSF10CO14798 259 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 RGS13O14921 159 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 PRKRAO75569 313 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 CLEC3AO75596 197 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 GPX5O75715 221 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 CCNKO75909 580 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 MFN2O95140 757 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 LGI1O95970 557 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SSR2P43308 183 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 XKP51811 444 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 YPEL5P62699 121 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 GANABQ14697 944 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 MLC1Q15049 377 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SSX1Q16384 188 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 DUSP7Q16829 419 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 KLHL22Q53GT1 634 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 MFSD4BQ5TF39 518 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 WASH2PQ6VEQ5 465 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ABI3BPQ7Z7G0 1075 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 NANOGP1Q8N7R0 232 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 NR4A3Q92570 626 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 OR2B2Q9GZK3 357 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 POLR2J3Q9H1A7 115 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SRMSQ9H3Y6 488 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 CXorf36Q9H7Y0 433 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 OR6C2Q9NZP2 312 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ACAD8Q9UKU7 415 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SNX8Q9Y5X2 465 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 LRP4O75096 1905 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 WDR87Q6ZQQ6 2873 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 A0A0A6YYD5 115 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 PRAMEF26H0Y7S4 382 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 PDPK1O15530 556 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ERI3O43414 337 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 SH3BP5O60239 455 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 OR10H3O60404 316 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ENTPD6O75354 484 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 IL1AP01583 271 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 IGLV3-19P01714 112 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ELAVL4P26378 380 aaKnown RBP10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 POU1F1P28069 291 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 KCNJ5P48544 419 aa10.36□□□□□ -0.75
SH3RF1-203ENST00000508685 ANXA11P50995 505 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms