RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ATP12AP54707 1039 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 SP4Q02446 784 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 EIF4EBP2Q13542 120 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 DLG2Q15700 870 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 PIGGQ5H8A4 983 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CFAP157Q5JU67 520 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 BRMS1LQ5PSV4 323 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 MARCH8Q5T0T0 291 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CES4AQ5XG92 561 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 AP1ARQ63HQ0 302 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 PM20D1Q6GTS8 502 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 ZYG11AQ6WRX3 759 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 ISCA2Q86U28 154 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 COLGALT1Q8NBJ5 622 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 APPL2Q8NEU8 664 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 DGCR14Q96DF8 476 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 CFAP36Q96G28 342 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 PIWIL1Q96J94 861 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 ZNF582Q96NG8 517 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 GBP5Q96PP8 586 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 RANBP9Q96S59 729 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 KLF6Q99612 283 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 C19orf43Q9BQ61 176 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 MRPL57Q9BQC6 102 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 THTPAQ9BU02 230 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 FTHL17Q9BXU8 183 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 C20orf27Q9GZN8 174 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 DHX35Q9H5Z1 703 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 EFCAB1Q9HAE3 211 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 NMRAL1Q9HBL8 299 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CSNK1G1Q9HCP0 422 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 SLC52A3Q9NQ40 469 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 OSER1Q9NX31 292 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 PTTG2Q9NZH5 202 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 NPAP1Q9NZP6 1156 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 CPSF2Q9P2I0 782 aaKnown RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 VANGL2Q9ULK5 521 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 TMCO1Q9UM00 188 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 POMPQ9Y244 141 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 HEY1Q9Y5J3 304 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 SPIN1Q9Y657 262 aaPredicted RBP4.33□□□□□ -1.72
SSR3-209ENST00000498205 RPS6KL1Q9Y6S9 549 aa4.33□□□□□ -1.72
SSR3-209ENST00000498205 SMIM28A0A1B0GU29 152 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PRSS51A0A1B0GVH4 220 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 hCG_1807616A0A1W2PRN6 198 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 TRIM64A6NGJ6 449 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 TRIM64CA6NLI5 447 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 DUXAA6NLW8 204 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 BBIP1A8MTZ0 92 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 MAGEB17A8MXT2 336 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 HHLA1C9JL84 531 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 HAS3O00219 553 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 EEF2KO00418 725 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 CYB561D2O14569 222 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 MFSD11O43934 449 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 SYNCRIPO60506 623 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 HUS1O60921 280 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 EML2O95834 649 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 IGLV3-25P01717 112 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 C2P06681 752 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 CCNCP24863 283 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PSMA3P25788 255 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PTPN3P26045 913 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 RPL9P32969 192 aaKnown RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 DAOAP59103 153 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 ERVK11-1P61568 191 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 FKBP1BP68106 108 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PRKCZQ05513 592 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 KDSRQ06136 332 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 STX5Q13190 355 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 CUL3Q13618 768 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PRPSAP1Q14558 356 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 CA9Q16790 459 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 SEL1L3Q68CR1 1132 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 SCYL2Q6P3W7 929 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 UGT2A3Q6UWM9 527 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 IZUMO2Q6UXV1 221 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PIGZQ86VD9 579 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 SLC22A9Q8IVM8 553 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 ZNF567Q8N184 647 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 NUP93Q8N1F7 819 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 LRRC43Q8N309 656 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 DCLK2Q8N568 766 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 ICA1LQ8NDH6 482 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 UBA3Q8TBC4 463 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 WDR20Q8TBZ3 569 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 URGCPQ8TCY9 931 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 HCAR2Q8TDS4 363 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 ADAMTS16Q8TE57 1224 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 PTPMT1Q8WUK0 201 aaPredicted RBP4.32□□□□□ -1.72
SSR3-209ENST00000498205 ROPN1LQ96C74 230 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 ASB9Q96DX5 294 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 VPS39Q96JC1 886 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 LRR1Q96L50 414 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 RILPQ96NA2 401 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 TSNARE1Q96NA8 513 aa4.32□□□□□ -1.72
SSR3-209ENST00000498205 MYADMQ96S97 322 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms