RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 MC3RP41968 323 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 NCBP2P52298 156 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 GALNTL6Q49A17 601 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 EXOSC6Q5RKV6 272 aaKnown RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 TMEM81Q6P7N7 255 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 C3P1Q6ZMU1 363 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 RGS9BPQ6ZS82 235 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 MAMDC2Q7Z304 686 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 ZNF551Q7Z340 670 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 SAMD14Q8IZD0 417 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 FAM9CQ8IZT9 166 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 OR2L13Q8N349 312 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 FAM109AQ8N4B1 249 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 HOXB13Q92826 284 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 ELP4Q96EB1 424 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 HSPBAP1Q96EW2 488 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 SECISBP2Q96T21 854 aaKnown RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 REEP4Q9H6H4 257 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 TNFRSF10DQ9UBN6 386 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 C19orf53Q9UNZ5 99 aaPredicted RBP12.51□□□□□ -0.41
PDCD11-206ENST00000493610 ENTPD4Q9Y227 616 aa12.51□□□□□ -0.41
PDCD11-206ENST00000493610 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 C17orf51A8MQB3 221 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 AKAP10O43572 662 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 CDC40O60508 579 aaKnown RBP eCLIP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 PEX11AO75192 247 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 SKAP2O75563 359 aaPredicted RBP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 MPIP34949 423 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 PTGS2P35354 604 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 CDK9P50750 372 aaKnown RBP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 ABCE1P61221 599 aaKnown RBP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 PLGLB1Q02325 96 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 RBPJQ06330 500 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 HLA-DQA1Q5Y7H0 255 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 TMEM107Q6UX40 140 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 WDR53Q7Z5U6 358 aaPredicted RBP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 CD163Q86VB7 1156 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 SLC22A16Q86VW1 577 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 RIMKLAQ8IXN7 391 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 DDIASQ8IXT1 998 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 DIO2Q92813 273 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 TMBIM1Q969X1 311 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 GIMAP5Q96F15 307 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 SLC35A4Q96G79 324 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 MAGED4Q96JG8 741 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 RILPQ96NA2 401 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 BBS4Q96RK4 519 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 EML4Q9HC35 981 aaKnown RBP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 PFDN4Q9NQP4 134 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 SIRT3Q9NTG7 399 aaPredicted RBP12.5□□□□□ -0.41
PDCD11-206ENST00000493610 NTMQ9P121 344 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 PRODH2Q9UF12 536 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 ATP6V1HQ9UI12 483 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 CFL2Q9Y281 166 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 TMED5Q9Y3A6 229 aa12.5□□□□□ -0.41
PDCD11-206ENST00000493610 PHF3Q92576 2039 aaKnown RBP12.49□□□□□ -0.41
PDCD11-206ENST00000493610 PCNX3Q9H6A9 2034 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 TMEM114B3SHH9 223 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 ACOX3O15254 700 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 ERN1O75460 977 aaKnown RBP12.49□□□□□ -0.41
PDCD11-206ENST00000493610 ZWINTO95229 277 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 IFI6P09912 130 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 ABOP16442 354 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
PDCD11-206ENST00000493610 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
PDCD11-206ENST00000493610 GAS1P54826 345 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 DCAF7P61962 342 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 PTGR1Q14914 329 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 C6orf163Q5TEZ5 329 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 RTL6Q6ICC9 239 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 NUP54Q7Z3B4 507 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 SLC34A3Q8N130 599 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 LIX1Q8N485 282 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 PPP3R2Q96LZ3 170 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 DOHHQ9BU89 302 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 C1orf50Q9BV19 199 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 RTN4RQ9BZR6 473 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 SLC6A15Q9H2J7 730 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 CENPHQ9H3R5 247 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 GALNT9Q9HCQ5 603 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 ACKR4Q9NPB9 350 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 MIEF1Q9NQG6 463 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 PNPLA3Q9NST1 481 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 GIMAP4Q9NUV9 329 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 FLRT3Q9NZU0 649 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 KIAA1549Q9HCM3 1950 aa12.49□□□□□ -0.41
PDCD11-206ENST00000493610 TMEM120BA0PK00 339 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 C2orf72A6NCS6 295 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 OR6C70A6NIJ9 312 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 E9PLN8 166 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 ACOT7O00154 380 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 AQP7O14520 342 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 ICOSLGO75144 302 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 SNNO75324 88 aaPredicted RBP12.48□□□□□ -0.41
PDCD11-206ENST00000493610 BCAS2O75934 225 aaPredicted RBP12.48□□□□□ -0.41
PDCD11-206ENST00000493610 CHEK2O96017 543 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 IGKV1D-16P01601 117 aa12.48□□□□□ -0.41
PDCD11-206ENST00000493610 LAMP1P11279 417 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms