RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 EBPLQ9BY08 206 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM107BQ9H098 131 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 WDR55Q9H6Y2 383 aaPredicted RBP11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 SACM1LQ9NTJ5 587 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 TNFRSF10DQ9UBN6 386 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 GIMAP2Q9UG22 337 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 MCM8Q9UJA3 840 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 CHCHD2Q9Y6H1 151 aaPredicted RBP11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 TEP1Q99973 2627 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 A0A0G2JND7 137 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 A0A1B0GVC2 190 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 GMNCA6NCL1 334 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SDHDO14521 159 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 LRATO95237 230 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 CPMP14384 443 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 XKP51811 444 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SMSP52788 366 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 RAE1P78406 368 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 PLGLB1Q02325 96 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF763Q0D2J5 394 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SF3A3Q12874 501 aaKnown RBP eCLIP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC9B1Q4ZJI4 515 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 RFTN2Q52LD8 501 aaPredicted RBP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 C6orf136Q5SQH8 315 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 PRAMEF20Q5VT98 475 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC22A10Q63ZE4 541 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM180BQ6P0A1 224 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC48A1Q6P1K1 146 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 GK5Q6ZS86 529 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 MTERF4Q7Z6M4 381 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 MCEMP1Q8IX19 187 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF295-AS1Q8N0V1 137 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC15A4Q8N697 577 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 ACBD4Q8NC06 268 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 OR4K14Q8NGD5 310 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 CEP70Q8NHQ1 597 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC22A8Q8TCC7 542 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 ADIPOR1Q96A54 375 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 ART5Q96L15 291 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 SIKE1Q9BRV8 207 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 FAIM2Q9BWQ8 316 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 NOP53Q9NZM5 478 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 CNOT11Q9UKZ1 510 aaKnown RBP11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 DTX4Q9Y2E6 619 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 CCL27Q9Y4X3 112 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 PCDHA9Q9Y5H5 950 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 NINQ8N4C6 2090 aa11.67□□□□□ -0.54
SEC61A1-206ENST00000491668 OR6C76A6NM76 312 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 NPIPB8E9PQR5 432 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 DYRK3O43781 588 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 CLDN14O95500 239 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 P04436 131 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SNRPB2P08579 225 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 PRPS2P11908 318 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 ENDOUP21128 410 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 PIK3R1P27986 724 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 GSTM5P46439 218 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 ALDH9A1P49189 494 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 IDH3AP50213 366 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SEC24CP53992 1094 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 TRA2BP62995 288 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 EMX2Q04743 252 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 RPS6KA2Q15349 733 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 NTRK2Q16620 822 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SMU1Q2TAY7 513 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 IL23RQ5VWK5 629 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 GALNT18Q6P9A2 607 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM111BQ6SJ93 734 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 EPGNQ6UW88 154 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 TRILQ7L0X0 811 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC29A4Q7RTT9 530 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SPATA19Q7Z5L4 167 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SLC22A16Q86VW1 577 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 GALNT12Q8IXK2 581 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 FBXW8Q8N3Y1 598 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM109AQ8N4B1 249 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 RFWD2Q8NHY2 731 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 C16orf78Q8WTQ4 265 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 NTNG2Q96CW9 530 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 C11orf24Q96F05 449 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF681Q96N22 645 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF317Q96PQ6 595 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 TRIM8Q9BZR9 551 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 OR10A5Q9H207 317 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF703Q9H7S9 590 aaPredicted RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 TCF7L2Q9NQB0 619 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 MIEF1Q9NQG6 463 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 PNPLA3Q9NST1 481 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.66□□□□□ -0.548e-6■□□□□ 9.8
SEC61A1-206ENST00000491668 SIRT5Q9NXA8 310 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 HEY2Q9UBP5 337 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF639Q9UID6 485 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 EXPH5Q8NEV8 1989 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 CCDC168Q8NDH2 2452 aa11.66□□□□□ -0.54
SEC61A1-206ENST00000491668 AKAP9Q99996 3911 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 C2orf92A0A1B0GVN3 265 aa11.65□□□□□ -0.54
SEC61A1-206ENST00000491668 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms