RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 SPPL2AQ8TCT8 520 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 ZNF675Q8TD23 568 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 TCP10LQ8TDR4 215 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 GFM2Q969S9 779 aaKnown RBP8.38□□□□□ -1.07
HDAC6-232ENST00000489053 ADIPOR1Q96A54 375 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 PPCDCQ96CD2 204 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 CHMP6Q96FZ7 201 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 METTL2AQ96IZ6 378 aaKnown RBP8.38□□□□□ -1.07
HDAC6-232ENST00000489053 GATA5Q9BWX5 397 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-232ENST00000489053 OSBPL11Q9BXB4 747 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 ZNF703Q9H7S9 590 aaPredicted RBP8.38□□□□□ -1.07
HDAC6-232ENST00000489053 C3orf14Q9HBI5 128 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 KCNJ16Q9NPI9 418 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 PNPLA3Q9NST1 481 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 MKS1Q9NXB0 559 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 DKKL1Q9UK85 242 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 CNOT11Q9UKZ1 510 aaKnown RBP8.38□□□□□ -1.07
HDAC6-232ENST00000489053 TMED5Q9Y3A6 229 aa8.38□□□□□ -1.07
HDAC6-232ENST00000489053 AKAP10O43572 662 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ERLIN1O75477 346 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 HSPA4LO95757 839 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 CBX7O95931 251 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ABCB1P08183 1280 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-232ENST00000489053 CELA3AP09093 270 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 LINC00032P0C843 101 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ALDH3A1P30838 453 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 RPL3P39023 403 aaKnown RBP8.37□□□□□ -1.07
HDAC6-232ENST00000489053 MC3RP41968 323 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 CASP3P42574 277 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 FOXO1Q12778 655 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 SNTA1Q13424 505 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 DECR1Q16698 335 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 HYAL4Q2M3T9 481 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 VPS26BQ4G0F5 336 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ATP6AP1LQ52LC2 224 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ARL13AQ5H913 290 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-232ENST00000489053 C1orf185Q5T7R7 199 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 FAM219BQ5XKK7 198 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 BICRALQ6AI39 1079 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 TMEM107Q6UX40 140 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 LYPD8Q6UX82 237 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 SH2D5Q6ZV89 423 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 GDF7Q7Z4P5 450 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 R3HCC1LQ7Z5L2 792 aaKnown RBP8.37□□□□□ -1.07
HDAC6-232ENST00000489053 FGD2Q7Z6J4 655 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 NUDCD3Q8IVD9 361 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 MCEMP1Q8IX19 187 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 PM20D2Q8IYS1 436 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 OR4K17Q8NGC6 315 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 OR14L1PQ8NHC6 308 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 NEIL3Q8TAT5 605 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 TWIST2Q8WVJ9 160 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 TMBIM1Q969X1 311 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ZBED6CLQ96FA7 236 aaPredicted RBP8.37□□□□□ -1.07
HDAC6-232ENST00000489053 PPP3R2Q96LZ3 170 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ZNF681Q96N22 645 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ADOQ96SZ5 270 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 CCT7Q99832 543 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 PAIP2Q9BPZ3 127 aaKnown RBP8.37□□□□□ -1.07
HDAC6-232ENST00000489053 MECRQ9BV79 373 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 ANGPTL4Q9BY76 406 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 PARD6BQ9BYG5 372 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 SLC6A15Q9H2J7 730 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 FOLH1BQ9HBA9 442 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 Q9N2J8 555 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 KCNK9Q9NPC2 374 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 PLSCR2Q9NRY7 297 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 SIRT5Q9NXA8 310 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 SH3BP4Q9P0V3 963 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 SLC17A7Q9P2U7 560 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 TNFRSF10DQ9UBN6 386 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 CAMK2AQ9UQM7 478 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 DTX4Q9Y2E6 619 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 C15orf41Q9Y2V0 281 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 TRAF6Q9Y4K3 522 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 LIPGQ9Y5X9 500 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 CREBBPQ92793 2442 aa8.37□□□□□ -1.07
HDAC6-232ENST00000489053 A0A1B0GVC2 190 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 WDR91A4D1P6 747 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 OR6C70A6NIJ9 312 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 LRRC3CA6NJW4 275 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MYO1GB0I1T2 1018 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 PLOD3O60568 738 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 TRIM3O75382 744 aaPredicted RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 KCNH1O95259 989 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 RFPL3SP0C7P2 107 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 S1PR1P21453 382 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 EMDP50402 254 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MANFP55145 182 aaKnown RBP8.36□□□□□ -1.07
HDAC6-232ENST00000489053 CORO7P57737 925 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 DUSP2Q05923 314 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 MGAT2Q10469 447 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 HSPB3Q12988 150 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 DUSP8Q13202 625 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 RCAN2Q14206 197 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 SPDYE7PQ495Y7 208 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 CEP85LQ5SZL2 805 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 KANK2Q63ZY3 851 aa8.36□□□□□ -1.07
HDAC6-232ENST00000489053 TIGD3Q6B0B8 471 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms