RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 ENPP6Q6UWR7 440 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 QSOX2Q6ZRP7 698 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 SERPINA11Q86U17 422 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 ZNF595Q8IYB9 648 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 TSLPQ969D9 159 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 TMBIM1Q969X1 311 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 RDH12Q96NR8 316 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 SEMA3GQ9NS98 782 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 ZMIZ1Q9ULJ6 1067 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 MRPS33Q9Y291 106 aaKnown RBP18.09■□□□□ 0.49
CCM2-216ENST00000488727 HS3ST3B1Q9Y662 390 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 IGKV3D-11A0A0A0MRZ8 115 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 LDB3O75112 727 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 OR6B1O95007 311 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 LRATO95237 230 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 IL3P08700 152 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 GNAO1P09471 354 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 MMP11P24347 488 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 DAG1Q14118 895 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 LANCL3Q6ZV70 420 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 GPR155Q7Z3F1 870 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 PPP1R32Q7Z5V6 425 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 CAMKMTQ7Z624 323 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 PATL1Q86TB9 770 aaKnown RBP18.09■□□□□ 0.49
CCM2-216ENST00000488727 FAM86B1Q8N7N1 296 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 PLPP5Q8NEB5 264 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 FBXO30Q8TB52 745 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 MAGEE2Q8TD90 523 aaPredicted RBP18.09■□□□□ 0.49
CCM2-216ENST00000488727 CPNE5Q9HCH3 593 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 NECTIN3Q9NQS3 549 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 PRTFDC1Q9NRG1 225 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 GMEB1Q9Y692 573 aa18.09■□□□□ 0.49
CCM2-216ENST00000488727 PGRMC2O15173 223 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 ALOX12BO75342 701 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 TLX1P31314 330 aaPredicted RBP18.08■□□□□ 0.48
CCM2-216ENST00000488727 OTX2P32243 289 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 HSD17B7P56937 341 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 MC1RQ01726 317 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 TBPL2Q6SJ96 375 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 CCDC81Q6ZN84 652 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 ANKRD46Q86W74 232 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 SVOPLQ8N434 492 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 CDC26Q8NHZ8 85 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 AURKBQ96GD4 344 aaPredicted RBP18.08■□□□□ 0.48
CCM2-216ENST00000488727 PTCHD1Q96NR3 888 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 YTHDF1Q9BYJ9 559 aaKnown RBP18.08■□□□□ 0.48
CCM2-216ENST00000488727 MYNNQ9NPC7 610 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 PRDM9Q9NQV7 894 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 MMACHCQ9Y4U1 282 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 PTPRQQ9UMZ3 2332 aa18.08■□□□□ 0.48
CCM2-216ENST00000488727 ENO4A6NNW6 628 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 EVPLLA8MZ36 301 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 CLDN4O14493 209 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 SOCS6O14544 535 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 SCAMP2O15127 329 aaKnown RBP18.07■□□□□ 0.48
CCM2-216ENST00000488727 FGF17O60258 216 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 GUCY1B2O75343 617 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 CYC1P08574 325 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 PRKAR1AP10644 381 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 COX7A2P14406 83 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 ROR2Q01974 943 aaKnown RBP18.07■□□□□ 0.48
CCM2-216ENST00000488727 SLC13A2Q13183 592 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 MYBPC3Q14896 1274 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 BROXQ5VW32 411 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 TTC33Q6PID6 262 aaPredicted RBP18.07■□□□□ 0.48
CCM2-216ENST00000488727 TMEM205Q6UW68 189 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 ALDH16A1Q8IZ83 802 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 EID3Q8N140 333 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 C10orf111Q8N326 155 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 ZFP28Q8NHY6 868 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 CYGBQ8WWM9 190 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 ANKRD9Q96BM1 317 aaPredicted RBP18.07■□□□□ 0.48
CCM2-216ENST00000488727 C8orf44Q96CB5 159 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 USE1Q9NZ43 259 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 C5AR2Q9P296 337 aa18.07■□□□□ 0.48
CCM2-216ENST00000488727 EXO1Q9UQ84 846 aaKnown RBP18.07■□□□□ 0.48
CCM2-216ENST00000488727 C1orf226A1L170 272 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 BLACEA4D250 179 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 CDC14CA4D256 554 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ZNF891A8MT65 544 aaPredicted RBP18.06■□□□□ 0.48
CCM2-216ENST00000488727 CTNSO60931 367 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 PRKD3O94806 890 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ALPLP05186 524 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 GSNP06396 782 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 C8orf89P0DMQ9 161 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ID2Q02363 134 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 CDC20Q12834 499 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 NSDHLQ15738 373 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 CRTC2Q53ET0 693 aaPredicted RBP18.06■□□□□ 0.48
CCM2-216ENST00000488727 FAM71E1Q6IPT2 247 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ERICH5Q6P6B1 374 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 KIRREL2Q6UWL6 708 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 MRGPREQ86SM8 312 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 OR4N5Q8IXE1 308 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 OR7A2PQ8NGA2 310 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 ADAMTS16Q8TE57 1224 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 NCLNQ969V3 563 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 FBXL20Q96IG2 436 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 PHF12Q96QT6 1004 aa18.06■□□□□ 0.48
CCM2-216ENST00000488727 TRIM4Q9C037 500 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms