RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 VASH1Q7L8A9 365 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ARHGAP22Q7Z5H3 698 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 CYP4Z1Q86W10 505 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 EPHX4Q8IUS5 362 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 VWA5B2Q8N398 1253 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MARVELD2Q8N4S9 558 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 DHRSXQ8N5I4 330 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MAGEE2Q8TD90 523 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SLC9A6Q92581 669 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 RIT1Q92963 219 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 FKBP10Q96AY3 582 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF501Q96CX3 271 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 GIMAP5Q96F15 307 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 C16orf58Q96GQ5 468 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 C7orf34Q96L11 122 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF354BQ96LW1 612 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 COL21A1Q96P44 957 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF300Q96RE9 604 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 STACQ99469 402 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 TREX2Q9BQ50 279 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 PINK1Q9BXM7 581 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ALOXE3Q9BYJ1 711 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ZNF304Q9HCX3 659 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ADAP2Q9NPF8 381 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 DUSP22Q9NRW4 184 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SMPD3Q9NY59 655 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 USE1Q9NZ43 259 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 MAT2BQ9NZL9 334 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SLC13A4Q9UKG4 626 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 RARRES3Q9UL19 164 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 ABCG2Q9UNQ0 655 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SLC9A8Q9Y2E8 581 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SAMHD1Q9Y3Z3 626 aaKnown RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 PCDHGB7Q9Y5F8 929 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 RP1P56715 2156 aa6.59□□□□□ -1.35
SF3A3-206ENST00000487062 COL5A1P20908 1838 aaPredicted RBP6.59□□□□□ -1.35
SF3A3-206ENST00000487062 SDK1Q7Z5N4 2213 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CABIN1Q9Y6J0 2220 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 IGHV5-10-1A0A0J9YXX1 117 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MYOCOSA0A1B0GUC4 107 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 A0A1W2PQM1 296 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 C7orf72A4D263 438 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 H0YAE9 185 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 TNFRSF11BO00300 401 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 FLRT2O43155 660 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 HS6ST1O60243 411 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 DNAJB5O75953 348 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 H6PDO95479 791 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 IFNA16P05015 189 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ALPPP05187 535 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 GP1BAP07359 652 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 THRBP10828 461 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ACP2P11117 423 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 RHCEP18577 417 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 TNNI3P19429 210 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CD247P20963 164 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 STT3AP46977 705 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 KCNJ5P48544 419 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SMIM11AP58511 58 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 POU6F2P78424 691 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MGAT2Q10469 447 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MERTKQ12866 999 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF155Q12901 538 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MAPK11Q15759 364 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SYT16Q17RD7 645 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ARHGAP11BQ3KRB8 267 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 NHSL2Q5HYW2 709 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MFSD4BQ5TF39 518 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ARHGAP40Q5TG30 622 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 TTC23Q5W5X9 447 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 LAIR1Q6GTX8 287 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 KRT80Q6KB66 452 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 HEPHL1Q6MZM0 1159 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 RHBDD2Q6NTF9 364 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF574Q6ZN55 896 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 QSOX2Q6ZRP7 698 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF295-AS1Q8N0V1 137 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 METTL27Q8N6F8 245 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 COX18Q8N8Q8 333 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SMYD1Q8NB12 490 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SLC16A11Q8NCK7 471 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CHDHQ8NE62 594 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF555Q8NEP9 628 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 OR2I1PQ8NGU4 316 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 GPR151Q8TDV0 419 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CYGBQ8WWM9 190 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 NR4A3Q92570 626 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 PMM1Q92871 262 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CDS1Q92903 461 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MARVELD3Q96A59 401 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CTHRC1Q96CG8 243 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 SLC35A4Q96G79 324 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CNDP2Q96KP4 475 aaKnown RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 CNBD2Q96M20 576 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 PTCHD1Q96NR3 888 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 MYCBPQ99417 103 aaPredicted RBP6.58□□□□□ -1.36
SF3A3-206ENST00000487062 EPYCQ99645 322 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 ADI1Q9BV57 179 aa6.58□□□□□ -1.36
SF3A3-206ENST00000487062 GABARAPL1Q9H0R8 117 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms