RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 DHODHQ02127 395 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 HNRNPDQ14103 355 aaKnown RBP3.83□□□□□ -1.8
VPS13A-211ENST00000484581 TFDP1Q14186 410 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 FFAR4Q5NUL3 377 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 FAM53AQ6NSI3 398 aaPredicted RBP3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 TAS2R42Q7RTR8 314 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 DPY19L4Q7Z388 723 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF683Q8IZ20 524 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 BHLHE23Q8NDY6 225 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 OR10G7Q8NGN6 311 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 DLX4Q92988 240 aaPredicted RBP3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ADIPOR1Q96A54 375 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 UPRTQ96BW1 309 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 OMDQ99983 421 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 C19orf43Q9BQ61 176 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 ANP32EQ9BTT0 268 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 APOOQ9BUR5 198 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 TBC1D10AQ9BXI6 508 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 Q9HAA7 133 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 PLEKHA3Q9HB20 300 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 APMAPQ9HDC9 416 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 NRN1Q9NPD7 142 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 GHRLQ9UBU3 117 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 CLEC4AQ9UMR7 237 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 PPP1R3CQ9UQK1 317 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 SLC9A8Q9Y2E8 581 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 SLCO1B1Q9Y6L6 691 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 CSNK1G3Q9Y6M4 447 aa3.83□□□□□ -1.8
VPS13A-211ENST00000484581 NPIPA5A0A0B4J1W7 369 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 IGHV3-20A0A0C4DH32 117 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 NPIPA5E9PKD4 350 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 NEDD8-MDP1E9PL57 170 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 H0Y8G0 127 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 SGK1O00141 431 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 IL1BP01584 269 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF44P15621 663 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 HNF1AP20823 631 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 NT5EP21589 574 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 GDI1P31150 447 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 MAP2K2P36507 400 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 ID1P41134 155 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 TDO2P48775 406 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 NDST2P52849 883 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 AIF1P55008 147 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 DLX5P56178 289 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 BEX3Q00994 111 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 IL9RQ01113 521 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 PJVKQ0ZLH3 352 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 MTF1Q14872 753 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 MLF2Q15773 248 aaPredicted RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 EXOC3L2Q2M3D2 409 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 ZNF718Q3SXZ3 478 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 BEND6Q5SZJ8 279 aaPredicted RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 C3P1Q6ZMU1 363 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 Q6ZSR9 355 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 LUZP1Q86V48 1076 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 NR2C2APQ86WQ0 139 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 SPEM1Q8N4L4 309 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 SYT14Q8NB59 555 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 OR52K2Q8NGK3 314 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 NANPQ8TBE9 248 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 DHTKD1Q96HY7 919 aaPredicted RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 ALKBH3Q96Q83 286 aaPredicted RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 USP28Q96RU2 1077 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 CRNKL1Q9BZJ0 848 aaKnown RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 MEAF6Q9HAF1 191 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 ELOVL3Q9HB03 270 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 FAM114A2Q9NRY5 505 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 RABL2AQ9UBK7 228 aaPredicted RBP3.82□□□□□ -1.8
VPS13A-211ENST00000484581 KCNG2Q9UJ96 466 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 EMCNQ9ULC0 261 aa3.82□□□□□ -1.8
VPS13A-211ENST00000484581 A0A0U1RQS6 177 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 FBP2O00757 339 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 PRRG1O14668 218 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 EI24O14681 340 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 OR1F1O43749 312 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 MAGEC1O60732 1142 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 B4GALT2O60909 372 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 DUSP11O75319 330 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 NXPH4O95158 308 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 IGKV3-20P01619 116 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 OPN1LWP04000 364 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CAPN1P07384 714 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 UQCRC2P22695 453 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 OPRL1P41146 370 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CEBPDP49716 269 aaPredicted RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 PEX3P56589 373 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 LINC01547P58512 204 aaPredicted RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 ERVK-16P61578 105 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CCNA1P78396 465 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CYCSP99999 105 aaKnown RBP3.81□□□□□ -1.8
VPS13A-211ENST00000484581 BNIP1Q12981 228 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CUL2Q13617 745 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 CAMK4Q16566 473 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 UPP1Q16831 310 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 UNC50Q53HI1 259 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 ATF7IP2Q5U623 682 aa3.81□□□□□ -1.8
VPS13A-211ENST00000484581 ARHGAP11AQ6P4F7 1023 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms