RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	AKT2	P31751	481 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	PRPH	P41219	470 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	SNRPD1	P62314	119 aa	Known RBP	4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	SIRPA	P78324	504 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	PPARD	Q03181	441 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	LGALS3BP	Q08380	585 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	P2RY6	Q15077	328 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	SDK2	Q58EX2	2172 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	HIVEP3	Q5T1R4	2406 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	TMEM211	Q6ICI0	200 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	KRT80	Q6KB66	452 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	TEX38	Q6PEX7	206 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	GTSCR1	Q86UQ5	136 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	HORMAD1	Q86X24	394 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	MFN1	Q8IWA4	741 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	APCDD1	Q8J025	514 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	GPD1L	Q8N335	351 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	ARL10	Q8N8L6	244 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	TC2N	Q8N9U0	490 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	FIBIN	Q8TAL6	211 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	VPS33A	Q96AX1	596 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	TMEM159	Q96B96	161 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	SLC45A3	Q96JT2	553 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	ACCS	Q96QU6	501 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	SPAG5	Q96R06	1193 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	IL12RB2	Q99665	862 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	ZNF106	Q9H2Y7	1883 aa	Known RBP	4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	LRRN3	Q9H3W5	708 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	HHATL	Q9HCP6	504 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	PLCXD1	Q9NUJ7	323 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	TBC1D7	Q9P0N9	293 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	APOBEC3B	Q9UH17	382 aa	Known RBP	4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	AMACR	Q9UHK6	382 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	ENTPD4	Q9Y227	616 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	CCL27	Q9Y4X3	112 aa		4.08	□□□□□ -1.76
PRKD3-208	ENST00000475912	RP1	P56715	2156 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	MYH11	P35749	1972 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	VPS13C	Q709C8	3753 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912		A0A0J9YWU9	116 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	LOC101059948	A0A1B0GTJ6	334 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912		A0A1B0GVY2	172 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912		A0A1W2PRB8	838 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	KRTAP9-6	A8MVA2	160 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	LMO7DN	F2Z398	122 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	T	O15178	435 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	HSPA4L	O95757	839 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CTSL	P07711	333 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	DLAT	P10515	647 aa	Known RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	NKX2-1	P43699	371 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	NDST1	P52848	882 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CDH13	P55290	713 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	YWHAG	P61981	247 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	RPS24	P62847	133 aa	Known RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	SLC1A5	Q15758	541 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	SNAPC1	Q16533	368 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	NADK2	Q4G0N4	442 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	KRBOX4	Q5JUW0	171 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	DCAF10	Q5QP82	559 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	MPP7	Q5T2T1	576 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	SPNS3	Q6ZMD2	512 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CAMKMT	Q7Z624	323 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	ZNF554	Q86TJ5	538 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	TMEM135	Q86UB9	458 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CARNMT1	Q8N4J0	409 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CPSF7	Q8N684	471 aa	Known RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912		Q8N9G6	341 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912		Q8NFD4	153 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	OR10S1	Q8NGN2	331 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	OR1J1	Q8NGS3	322 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CFAP61	Q8NHU2	1237 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	MRGPRD	Q8TDS7	321 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	TEKT4	Q8WW24	435 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	STARD8	Q92502	1023 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	HSD17B8	Q92506	261 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	NDRG1	Q92597	394 aa	Known RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	RAD54L	Q92698	747 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	MTERF3	Q96E29	417 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	NSL1	Q96IY1	281 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	LURAP1	Q96LR2	239 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	ZNF830	Q96NB3	372 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	KLF6	Q99612	283 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	GOLPH3L	Q9H4A5	285 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	PAK5	Q9P286	719 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	PILRA	Q9UKJ1	303 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	MRPS18B	Q9Y676	258 aa	Known RBP	4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	SHANK1	Q9Y566	2161 aa		4.07	□□□□□ -1.76
PRKD3-208	ENST00000475912	DOCK9	Q9BZ29	2069 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	CROCC	Q5TZA2	2017 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	IGHV4-4	A0A075B6R2	117 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912		A0A087WW49	117 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	SERINC4	A6NH21	518 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	ZNF233	A6NK53	670 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	SLCO1B7	G3V0H7	640 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	MKRN2OS	H3BPM6	223 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	MCF2L	O15068	1137 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	RAD1	O60671	282 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	IGLV3-27	P01718	113 aa		4.06	□□□□□ -1.76
PRKD3-208	ENST00000475912	RAF1	P04049	648 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms