RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PRSS48Q7RTY5 328 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 TMEM151BQ8IW70 566 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 TOR1AIP2Q8NFQ8 470 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 THRSPQ92748 146 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 DIABLOQ9NR28 239 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 NANSQ9NR45 359 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 MAU2Q9Y6X3 613 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 TRBV5-4A0A0C4DH59 114 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 ORC5O43913 435 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CKMT1AP12532 417 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 MAGEA8P43361 318 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 GPR4P46093 362 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
BRAT1-203ENST00000467558 KEAP1Q14145 624 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CCSMST1Q4G0I0 132 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 C6orf132Q5T0Z8 1188 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 METRNLQ641Q3 311 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 NRMQ8IXM6 262 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 MFSD9Q8NBP5 474 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 OR9Q2Q8NGE9 314 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 OR6N1Q8NGY5 312 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 LGALS12Q96DT0 336 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SLC41A3Q96GZ6 507 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 CFHR5Q9BXR6 569 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 NAALAD2Q9Y3Q0 740 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 SRCAPQ6ZRS2 3230 aa13.04□□□□□ -0.32
BRAT1-203ENST00000467558 RNF144AP50876 292 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 COL9A2Q14055 689 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ELOAQ14241 798 aaKnown RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 HS3ST5Q8IZT8 346 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 FAM86B1Q8N7N1 296 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 OR2L3Q8NG85 312 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 C1orf216Q8TAB5 229 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 TM9SF2Q99805 663 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 MS4A8Q9BY19 250 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ASIC5Q9NY37 505 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 LAMP5Q9UJQ1 280 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 A0A1W2PRQ8 180 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 J3QRK9 145 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 SGK494L7N484 410 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 TAF4O00268 1085 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 SRPX2O60687 465 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ARAFP10398 606 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 CBLBQ13191 982 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 TUBB3Q13509 450 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 UGT8Q16880 541 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 GFOD2Q3B7J2 385 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ARHGAP11AQ6P4F7 1023 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 GPALPP1Q8IXQ4 340 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ACBD7Q8N6N7 88 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 THAP3Q8WTV1 239 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ZFAND2BQ8WV99 257 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 TAMM41Q96BW9 452 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ZBTB20Q9HC78 741 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 BRD7Q9NPI1 651 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 ITGB1BP2Q9UKP3 347 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 AP1G1O43747 822 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 GPR75O95800 540 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 HTR1AP08908 422 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 SLC2A2P11168 524 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 MAPK3P27361 379 aaPredicted RBP13.03□□□□□ -0.32
BRAT1-203ENST00000467558 SLC15A1P46059 708 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 GMFBP60983 142 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 PDSS1Q5T2R2 415 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 BAIAP2Q9UQB8 552 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
BRAT1-203ENST00000467558 CLCA1A8K7I4 914 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 APOL3O95236 402 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 GSTT2BP0CG30 244 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 CDK5R2Q13319 367 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 LHFPL3Q86UP9 236 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 CREB3L4Q8TEY5 395 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 PNPLA2Q96AD5 504 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 FAM46AQ96IP4 442 aaKnown RBP13.02□□□□□ -0.32
BRAT1-203ENST00000467558 DOCK5Q9H7D0 1870 aa13.02□□□□□ -0.32
BRAT1-203ENST00000467558 TMEM202A6NGA9 273 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 ACOT8O14734 319 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 FURINP09958 794 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 HSD11B1P28845 292 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 MTNR1AP48039 350 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 REEP5Q00765 189 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 GTF2IRD2BQ6EKJ0 949 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 GTF2IRD2Q86UP8 949 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 C15orf40Q8WUR7 153 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 FTSJ1Q9UET6 329 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 ZNF221Q9UK13 617 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 SRPK3Q9UPE1 567 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 IQCMA0A1B0GVH7 501 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 A0A1B0GVT2 93 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 A0A1W2PQ72 361 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 H0YC42 278 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 H0YGG7 62 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 K7ESM1 405 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 OLFM2O95897 454 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 ZNF20P17024 532 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 ARF3P61204 181 aaPredicted RBP13.02□□□□□ -0.33
BRAT1-203ENST00000467558 LIPKQ5VXJ0 399 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 LINGO2Q7L985 606 aa13.02□□□□□ -0.33
BRAT1-203ENST00000467558 SLC22A8Q8TCC7 542 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms