RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 SZRD1Q7Z422 152 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 WDR53Q7Z5U6 358 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 RNF130Q86XS8 419 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 SLC15A3Q8IY34 581 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 PGAM4Q8N0Y7 254 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 LGI4Q8N135 537 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 HORMAD2Q8N7B1 307 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CDRT4Q8N9R6 151 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 KDF1Q8NAX2 398 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 SLC16A11Q8NCK7 471 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 C17orf47Q8NEP4 570 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 NUBPLQ8TB37 319 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 PNPT1Q8TCS8 783 aaKnown RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 PSMF1Q92530 271 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 HOPXQ9BPY8 73 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 ITPAQ9BY32 194 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 ACTRT3Q9BYD9 372 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 WWTR1Q9GZV5 400 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 C1orf21Q9H246 121 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 KAT8Q9H7Z6 458 aaKnown RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 EQTNQ9NQ60 294 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 WDR70Q9NW82 654 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 CMTM6Q9NX76 183 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 TAS2R1Q9NYW7 299 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 PRODH2Q9UF12 536 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 POLHQ9Y253 713 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 GPR55Q9Y2T6 319 aaPredicted RBP10.33□□□□□ -0.76
VCP-204ENST00000466100 EML6Q6ZMW3 1958 aa10.33□□□□□ -0.76
VCP-204ENST00000466100 TNRC6AQ8NDV7 1962 aaKnown RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 C15orf38-AP3S2A0A0A6YYH1 394 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 PRAMEF27A3QJZ7 478 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 TTC36A6NLP5 189 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 K7ENP7 123 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 HMGN4O00479 90 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 NME4O00746 187 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 ASNA1O43681 348 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 ICAM2P13598 275 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 ETFAP13804 333 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 ITPKBP27987 946 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 PPICP45877 212 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 KHKP50053 298 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 SLC7A2P52569 658 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 PRKAG1P54619 331 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 CASP9P55211 416 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 SOX8P57073 446 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 CORO7P57737 925 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 NCALDP61601 193 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 TXNL4AP83876 142 aaKnown RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 PSG6Q00889 435 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 FUT5Q11128 374 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 AIMP2Q13155 320 aaKnown RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 FADDQ13158 208 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 MAPK11Q15759 364 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 DUSP5Q16690 384 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 LACTB2Q53H82 288 aaPredicted RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.32□□□□□ -0.76
VCP-204ENST00000466100 INO80CQ6PI98 192 aaPredicted RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 SLC29A4Q7RTT9 530 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 NET1Q7Z628 596 aaPredicted RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 ARPINQ7Z6K5 226 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 CALHM3Q86XJ0 350 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 KBTBD2Q8IY47 623 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 TMEM102Q8N9M5 508 aaPredicted RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 OR5D16Q8NGK9 328 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 FBXO30Q8TB52 745 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 SNRNP27Q8WVK2 155 aaKnown RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 OTUB1Q96FW1 271 aaPredicted RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 FER1L6-AS2Q96M78 137 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 OR7D2Q96RA2 312 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 STACQ99469 402 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 YIPF4Q9BSR8 244 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 NXF5Q9H1B4 397 aaKnown RBP10.32□□□□□ -0.76
VCP-204ENST00000466100 OR51I1Q9H343 314 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 RAD21L1Q9H4I0 556 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 DUSP22Q9NRW4 184 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 GIN1Q9NXP7 522 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 NDE1Q9NXR1 346 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 TMEM181Q9P2C4 612 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 CFL2Q9Y281 166 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 KCNE3Q9Y6H6 103 aa10.32□□□□□ -0.76
VCP-204ENST00000466100 C2orf92A0A1B0GVN3 265 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 FRG2CA6NGY1 282 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 ARGFXA6NJG6 315 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 TO15178 435 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 ZNF354AO60765 605 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 HNRNPCL1O60812 293 aaKnown RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 ATP5HO75947 161 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 ZFAND5O76080 213 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 NADKO95544 446 aaPredicted RBP10.31□□□□□ -0.76
VCP-204ENST00000466100 DRD5P21918 477 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 MATN1P21941 496 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 SOX11P35716 441 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 PRIM2P49643 509 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 RRADP55042 308 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 DCAF7P61962 342 aa10.31□□□□□ -0.76
VCP-204ENST00000466100 ADRM1Q16186 407 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms