RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 FAM180BQ6P0A1 224 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 GALNT18Q6P9A2 607 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 TMEM200AQ86VY9 491 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 DDIASQ8IXT1 998 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 CCDC116Q8IYX3 515 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 PRR22Q8IZ63 422 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 FBXW8Q8N3Y1 598 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 ADCY4Q8NFM4 1077 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 TP53INP1Q96A56 240 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 METTL2AQ96IZ6 378 aaKnown RBP11.86□□□□□ -0.51
TREX1-203ENST00000456089 ZNF559Q9BR84 538 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 MECRQ9BV79 373 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 LRTM1Q9HBL6 345 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 SLC35C2Q9NQQ7 365 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 SIRT5Q9NXA8 310 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 CNIH4Q9P003 139 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 HEY2Q9UBP5 337 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 PRODH2Q9UF12 536 aa11.86□□□□□ -0.51
TREX1-203ENST00000456089 CNOT11Q9UKZ1 510 aaKnown RBP11.86□□□□□ -0.51
TREX1-203ENST00000456089 WBP11Q9Y2W2 641 aaKnown RBP11.86□□□□□ -0.51
TREX1-203ENST00000456089 POLR3HQ9Y535 204 aaPredicted RBP11.86□□□□□ -0.51
TREX1-203ENST00000456089 MPDZO75970 2070 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 SUSD5O60279 629 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 HOXD4P09016 255 aaPredicted RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 DDCP20711 480 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 CAPN3P20807 821 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 SERPINB5P36952 375 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 ZFP36L2P47974 494 aaKnown RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 SH2D4BQ5SQS7 431 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 WLSQ5T9L3 541 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 DESI1Q6ICB0 168 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 NOXRED1Q6NXP6 359 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 FAM111BQ6SJ93 734 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 NUDCD3Q8IVD9 361 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 CLYBLQ8N0X4 340 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 ZNF615Q8N8J6 731 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 AGR3Q8TD06 166 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 DIO2Q92813 273 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 SARAFQ96BY9 339 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 CNRIP1Q96F85 164 aaPredicted RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 DOHHQ9BU89 302 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 STMN4Q9H169 189 aaPredicted RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 ZFP64Q9NPA5 681 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 KCNK9Q9NPC2 374 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 C1orf109Q9NX04 203 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 EHD3Q9NZN3 535 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 BOKQ9UMX3 212 aaPredicted RBP11.85□□□□□ -0.51
TREX1-203ENST00000456089 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
TREX1-203ENST00000456089 HCN1O60741 890 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 CHRNGP07510 517 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 BPGMP07738 259 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 LINC00032P0C843 101 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 CREB1P16220 341 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 GDF1P27539 372 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 NTSP30990 170 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 EXOSC7Q15024 291 aaKnown RBP11.84□□□□□ -0.51
TREX1-203ENST00000456089 NNATQ16517 81 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 NTRK2Q16620 822 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 GALNTL6Q49A17 601 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 KANK2Q63ZY3 851 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 ZCCHC23Q6ZST2 131 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 SEM1Q6ZVN7 128 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 IKBIPQ70UQ0 350 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 FAM9CQ8IZT9 166 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 ZNF441Q8N8Z8 693 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 SIMC1Q8NDZ2 872 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 C17orf47Q8NEP4 570 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 OR52R1Q8NGF1 315 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 TWIST2Q8WVJ9 160 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 ZNF681Q96N22 645 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 TNFRSF12AQ9NP84 129 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 MYNNQ9NPC7 610 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 MAT2BQ9NZL9 334 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 DTX4Q9Y2E6 619 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 NPFFR2Q9Y5X5 522 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 C2CD3Q4AC94 2353 aa11.84□□□□□ -0.51
TREX1-203ENST00000456089 C15orf38-AP3S2A0A0A6YYH1 394 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 WDR91A4D1P6 747 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 TM9SF1O15321 606 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 TYROBPO43914 113 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 WDR1O75083 606 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 TRIM3O75382 744 aaPredicted RBP11.83□□□□□ -0.52
TREX1-203ENST00000456089 TRAPPC6AO75865 159 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 HSPA4LO95757 839 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 FGF4P08620 206 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 PCSK2P16519 638 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 DDX5P17844 614 aaKnown RBP11.83□□□□□ -0.52
TREX1-203ENST00000456089 GPX3P22352 226 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 PRPH2P23942 346 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 MAPK1P28482 360 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 NCBP2P52298 156 aaKnown RBP eCLIP11.83□□□□□ -0.52
TREX1-203ENST00000456089 DCAF7P61962 342 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 MRPS35P82673 323 aaKnown RBP11.83□□□□□ -0.52
TREX1-203ENST00000456089 DUSP2Q05923 314 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 DUSP8Q13202 625 aa11.83□□□□□ -0.52
TREX1-203ENST00000456089 RPS6KA2Q15349 733 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms