RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 OR5D18Q8NGL1 313 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 MEGF10Q96KG7 1140 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SIK2Q9H0K1 926 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SAV1Q9H4B6 383 aaPredicted RBP7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SRD5A3Q9H8P0 318 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PARPBPQ9NWS1 579 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 NAGKQ9UJ70 344 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 A0A0U1RRA0 63 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 DLGAP1O14490 977 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 AURKAO14965 403 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 DHHO43323 396 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 ERN1O75460 977 aaKnown RBP7.33□□□□□ -1.24
BRCC3-208ENST00000453705 AMY1AP04745 511 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 ITGAMP11215 1152 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF7P17097 686 aaPredicted RBP7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PRPS1L1P21108 318 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 FPR1P21462 350 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 FPR2P25090 351 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PTGER4P35408 488 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SOX18P35713 384 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PCYT1AP49585 367 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 NUP107P57740 925 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SPCS3P61009 180 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 EFNB1P98172 346 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 RBPJQ06330 500 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 FUT7Q11130 342 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 SDHAF4Q5VUM1 108 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PLAG1Q6DJT9 500 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 DCUN1D3Q8IWE4 304 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 LILRA2Q8N149 483 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PQLC1Q8N2U9 271 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 OTUB2Q96DC9 234 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PLEKHA8Q96JA3 519 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 GPR78Q96P69 363 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PGLYRP2Q96PD5 576 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 OR51V1Q9H2C8 321 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 PEMTQ9UBM1 199 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 ATG4BQ9Y4P1 393 aa7.33□□□□□ -1.24
BRCC3-208ENST00000453705 G3V2L1 256 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 LDB2O43679 373 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 GLP2RO95838 553 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 C8AP07357 584 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 GSTM1P09488 218 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 CTXN2P0C2S0 81 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 IL12BP29460 328 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 BCL6P41182 706 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 CTSKP43235 329 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 SLC6A12P48065 614 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 SLC34A1Q06495 639 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 SLC10A7Q0GE19 358 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 KLHL22Q53GT1 634 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 FBXO42Q6P3S6 717 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 ETV3LQ6ZN32 361 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 LUZP2Q86TE4 346 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 BCORP1Q8N888 145 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 DCAF4L2Q8NA75 395 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 OR13J1Q8NGT2 312 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 ZCCHC10Q8TBK6 192 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 SLC25A28Q96A46 364 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 PABPC5Q96DU9 382 aaKnown RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 NUDT11Q96G61 164 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 DHRS9Q9BPW9 319 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 RAB1BQ9H0U4 201 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 NLE1Q9NVX2 485 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 HCSTQ9UBK5 93 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 UBQLN2Q9UHD9 624 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 A0A1B0GUH1 482 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 C1QTNF3-AMACRE9PGA6 284 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 J3KR12 359 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 ARPC3O15145 178 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 SH3BGRLO75368 114 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 RASSF2P50749 326 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF140P52738 457 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 MEF2AQ02078 507 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 HYAL2Q12891 473 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 DGCR6Q14129 220 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 IHHQ14623 411 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 C6orf136Q5SQH8 315 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 N4BP2L1Q5TBK1 243 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 METTL21CQ5VZV1 264 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 PARS2Q7L3T8 475 aaKnown RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 NUDCD3Q8IVD9 361 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 LGI2Q8N0V4 545 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 GHDCQ8N2G8 530 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 C19orf18Q8NEA5 215 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 OR5D13Q8NGL4 314 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 PHF21AQ96BD5 680 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 CCDC126Q96EE4 140 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 TEFMQ96QE5 360 aaKnown RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 VPS35Q96QK1 796 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 ZNF184Q99676 751 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 ABHD6Q9BV23 337 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 PBX4Q9BYU1 374 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 MRPL17Q9NRX2 175 aaKnown RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 C20orf96Q9NUD7 363 aaPredicted RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 MRPL22Q9NWU5 206 aaKnown RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 GDE1Q9NZC3 331 aa7.32□□□□□ -1.24
BRCC3-208ENST00000453705 AGO1Q9UL18 857 aaKnown RBP7.32□□□□□ -1.24
BRCC3-208ENST00000453705 SNX7Q9UNH6 387 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms