RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 BSGP35613 385 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 HNRNPH2P55795 449 aaKnown RBP16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 CLDN8P56748 225 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 PTGR1Q14914 329 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 ZNF630Q2M218 657 aaPredicted RBP16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 ZNF750Q32MQ0 723 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 OPN5Q6U736 354 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 IKBIPQ70UQ0 350 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 SNX32Q86XE0 403 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 DOLPP1Q86YN1 238 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 LURAP1LQ8IV03 231 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 OR9I1Q8NGQ6 314 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 ZNF721Q8TF20 911 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 SENP5Q96HI0 755 aaPredicted RBP16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 NSL1Q96IY1 281 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 PHF12Q96QT6 1004 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 ZBTB18Q99592 522 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 EBPLQ9BY08 206 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 DPY30Q9C005 99 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 CCDC167Q9P0B6 97 aa16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 WBP11Q9Y2W2 641 aaKnown RBP16.64■□□□□ 0.25
SQSTM1-204ENST00000453046 GTF3C1Q12789 2109 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 GNG14A0A1W2PPG7 69 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 BBIP1A8MTZ0 92 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 E9PLN8 166 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 OR10H2O60403 315 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 PRKRAO75569 313 aaKnown RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 ANXA4P09525 319 aaPredicted RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 MNAT1P51948 309 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 UFM1P61960 85 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 IGLV3-21P80748 117 aaPredicted RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 DPY19L1Q2PZI1 675 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 CMPK2Q5EBM0 449 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 RTL4Q6ZR62 310 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 GK5Q6ZS86 529 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 TICAM1Q8IUC6 712 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 CHERPQ8IWX8 916 aaKnown RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 OR2M7Q8NG81 312 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 OR52N2Q8NGI0 321 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 FAM57AQ8TBR7 257 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 TSSK3Q96PN8 268 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 VKORC1Q9BQB6 163 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 PELOQ9BRX2 385 aaKnown RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 CNPPD1Q9BV87 410 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 DEFB127Q9H1M4 99 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 DDX31Q9H8H2 851 aaKnown RBP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 MYNNQ9NPC7 610 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 DEPPQ9NTK1 212 aa16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.63■□□□□ 0.25
SQSTM1-204ENST00000453046 A0A0A6YYD5 115 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 FAM166BA8MTA8 275 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 G3V3Y1 287 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 NR5A2O00482 541 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 PROM1O43490 865 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 CLDN14O95500 239 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 P04436 131 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 KLK1P06870 262 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 SNRPB2P08579 225 aaKnown RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 FAM58BPP0C7Q3 252 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 T-ENOLP0DO92 83 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 NR2F6P10588 404 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 COX6B1P14854 86 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 PRPS1L1P21108 318 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 CNR1P21554 472 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 TACR1P25103 407 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 HPCAL1P37235 193 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 RPL3P39023 403 aaKnown RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 NME5P56597 212 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 PPIAP62937 165 aaKnown RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 TRA2BP62995 288 aaKnown RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 CYLC2Q14093 348 aaPredicted RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 SPRED3Q2MJR0 410 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 COQ5Q5HYK3 327 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 ARHGAP11AQ6P4F7 1023 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 BLOC1S3Q6QNY0 202 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 FGD2Q7Z6J4 655 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 CD163Q86VB7 1156 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 SLC22A16Q86VW1 577 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 FUNDC1Q8IVP5 155 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 MCEMP1Q8IX19 187 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 ST13P4Q8IZP2 240 aaPredicted RBP16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 TESCQ96BS2 214 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 SGCZQ96LD1 299 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 FAM173AQ9BQD7 235 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 SACM1LQ9NTJ5 587 aa16.62■□□□□ 0.25
SQSTM1-204ENST00000453046 MYO9AB2RTY4 2548 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 PINLYPA6NC86 204 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 GLOD5A6NK44 160 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 TMPRSS11DO60235 418 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 GPR75O95800 540 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 GBAP04062 536 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 PRF1P14222 555 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 RASSF2P50749 326 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 POLR2JP52435 117 aaKnown RBP16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 MAPK12P53778 367 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 ZNF267Q14586 743 aaPredicted RBP16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 MPEG1Q2M385 716 aa16.61■□□□□ 0.25
SQSTM1-204ENST00000453046 PIGGQ5H8A4 983 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms