RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 PPIAP62937 165 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 MRPS22P82650 360 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 HSPB3Q12988 150 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 PTGR1Q14914 329 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 NNATQ16517 81 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 C4orf17Q53FE4 359 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 CPTPQ5TA50 214 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 PRAMEF20Q5VT98 475 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 TMEM198Q66K66 360 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 MTFR2Q6P444 385 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 TMEM107Q6UX40 140 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 SLC34A3Q8N130 599 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 OR10G3Q8NGC4 313 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 AMDHD1Q96NU7 426 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 DOHHQ9BU89 302 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 NXF5Q9H1B4 397 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 GLIPR2Q9H4G4 154 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 WDR55Q9H6Y2 383 aaPredicted RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 IL1RL2Q9HB29 575 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 ATP6V1HQ9UI12 483 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 MRTO4Q9UKD2 239 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 OR10H1Q9Y4A9 318 aa15.08■□□□□ 0
SF3A1-204ENST00000447376 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.08■□□□□ 0
SF3A1-204ENST00000447376 GOLGA8QA0A0J9YX86 632 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 GOLGA8OA6NCC3 632 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 FAM166BA8MTA8 275 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 GOLGA8NF8WBI6 632 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 PLOD2O00469 737 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 POLR3GO15318 223 aaPredicted RBP15.07■□□□□ 0
SF3A1-204ENST00000447376 HS6ST1O60243 411 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 SLC19A2O60779 497 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 ABCB7O75027 752 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 PPM1BO75688 479 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 STSP08842 583 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 IFI6P09912 130 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 ABCD3P28288 659 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 IL12BP29460 328 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 MC3RP41968 323 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 MASP1P48740 699 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 DNASE1L1P49184 302 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 PDE7AQ13946 482 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 VPS26BQ4G0F5 336 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 EPGNQ6UW88 154 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 SZRD1Q7Z422 152 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 PACS2Q86VP3 889 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 PRR22Q8IZ63 422 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 OR7G2Q8NG99 324 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 TMCO6Q96DC7 493 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 OMA1Q96E52 524 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 DTNBP1Q96EV8 351 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 ZNF597Q96LX8 424 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 JSRP1Q96MG2 331 aaPredicted RBP15.07■□□□□ 0
SF3A1-204ENST00000447376 SIKE1Q9BRV8 207 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 TTTY12Q9BZ98 90 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 DPY30Q9C005 99 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 METTL7AQ9H8H3 244 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 FOLH1BQ9HBA9 442 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 C3orf14Q9HBI5 128 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 DEPPQ9NTK1 212 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 ACSS1Q9NUB1 689 aaPredicted RBP15.07■□□□□ 0
SF3A1-204ENST00000447376 C19orf53Q9UNZ5 99 aaPredicted RBP15.07■□□□□ 0
SF3A1-204ENST00000447376 EXO1Q9UQ84 846 aaKnown RBP15.07■□□□□ 0
SF3A1-204ENST00000447376 DTX4Q9Y2E6 619 aa15.07■□□□□ 0
SF3A1-204ENST00000447376 CHCHD2Q9Y6H1 151 aaPredicted RBP15.07■□□□□ 0
SF3A1-204ENST00000447376 CLEC18AA5D8T8 446 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 TTC36A6NLP5 189 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ZNF195O14628 629 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 PRRG2O14669 202 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 LRRTM2O43300 516 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 EDF1O60869 148 aaKnown RBP15.06■□□□□ 0
SF3A1-204ENST00000447376 REM1O75628 298 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 SNX4O95219 450 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ESRRAP11474 423 aaPredicted RBP15.06■□□□□ 0
SF3A1-204ENST00000447376 IDO1P14902 403 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 PIGAP37287 484 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 CLNS1AP54105 237 aaKnown RBP15.06■□□□□ 0
SF3A1-204ENST00000447376 DIO3P55073 304 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 FBXW4P57775 412 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 C21orf58P58505 322 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 SLC9B1Q4ZJI4 515 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ANKRD26P1Q6NSI1 321 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ARHGAP11AQ6P4F7 1023 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 LYPD8Q6UX82 237 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 CLEC18BQ6UXF7 455 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 TMEM64Q6YI46 380 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 NUP54Q7Z3B4 507 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 SIAH3Q8IW03 269 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 SLC44A2Q8IWA5 706 aaPredicted RBP15.06■□□□□ 0
SF3A1-204ENST00000447376 FAM109AQ8N4B1 249 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 CLEC18CQ8NCF0 446 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ELP4Q96EB1 424 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 MAELQ96JY0 434 aaKnown RBP15.06■□□□□ 0
SF3A1-204ENST00000447376 BTBD9Q96Q07 612 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ZBTB18Q99592 522 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 LDAHQ9H6V9 325 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 EXO5Q9H790 373 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 Q9N2J8 555 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 ZFP64Q9NPA5 681 aa15.06■□□□□ 0
SF3A1-204ENST00000447376 GPR55Q9Y2T6 319 aaPredicted RBP15.06■□□□□ 0
SF3A1-204ENST00000447376 ANKRD33BA6NCL7 494 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms