RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 KLHL17Q6TDP4 642 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 FRRS1Q6ZNA5 592 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 Q6ZPB1 254 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ERI1Q8IV48 349 aaKnown RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 LINC00471Q8N535 108 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 OR6T1Q8NGN1 323 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 FAM81AQ8TBF8 368 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ADAMTS18Q8TE60 1221 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 IPCEF1Q8WWN9 437 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 GTPBP3Q969Y2 492 aaKnown RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 ANKRD9Q96BM1 317 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-202ENST00000439724 MPP4Q96JB8 637 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 GUCD1Q96NT3 240 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 DGCR6LQ9BY27 220 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 RAB33BQ9H082 229 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 PIGUQ9H490 435 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 STARD5Q9NSY2 213 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 PLCXD1Q9NUJ7 323 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 MAT2BQ9NZL9 334 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 EPHA6Q9UF33 1036 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 CDC14AQ9UNH5 594 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 THADAQ6YHU6 1953 aa11.02□□□□□ -0.65
SMAD3-202ENST00000439724 SZT2Q5T011 3432 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 SH3PXD2BA1X283 911 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 BLACEA4D250 179 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 TLCD2A6NGC4 264 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 ZAR1LA6NP61 321 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PTGES3LE9PB15 166 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 FAM227AF5H4B4 570 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CHST10O43529 356 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PIAS2O75928 621 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 ZIC2O95409 532 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CTSBP07858 339 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 GABRB1P18505 474 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 NT5EP21589 574 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PCSK6P29122 969 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CXCL12P48061 93 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 RGS19P49795 217 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PDX1P52945 283 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CRISP1P54107 249 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 UGT2B15P54855 530 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PIGFQ07326 219 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 MGAT2Q10469 447 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 NPTX1Q15818 432 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 DUSP5Q16690 384 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PRICKLE4Q2TBC4 344 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 TRMT12Q53H54 448 aaKnown RBP11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PGBD2Q6P3X8 592 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 Q7L0L9 218 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 UBALD2Q8IYN6 164 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 SVOPQ8N4V2 548 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CDRT4Q8N9R6 151 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 OR9A4Q8NGU2 314 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 RHOXF1Q8NHV9 184 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CDS1Q92903 461 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 UBE2FQ969M7 185 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 C12orf43Q96C57 262 aaKnown RBP11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CTHRC1Q96CG8 243 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 SIGLEC11Q96RL6 698 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 CD180Q99467 661 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 STACQ99469 402 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 IER2Q9BTL4 223 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 FNDC11Q9BVV2 318 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 UCK2Q9BZX2 261 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 LHPPQ9H008 270 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 QRSL1Q9H0R6 528 aaKnown RBP11.01□□□□□ -0.65
SMAD3-202ENST00000439724 DUSP15Q9H1R2 295 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-202ENST00000439724 RASSF1Q9NS23 344 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 MAN2C1Q9NTJ4 1040 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 ERVK-18Q9QC07 812 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 REV1Q9UBZ9 1251 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 AASSQ9UDR5 926 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 SLC13A4Q9UKG4 626 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 PLCL2Q9UPR0 1127 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 SATB2Q9UPW6 733 aa11.01□□□□□ -0.65
SMAD3-202ENST00000439724 TRIM64BA6NI03 449 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 FOXS1O43638 330 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 OR10H3O60404 316 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 NSA2O95478 260 aaKnown RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 AK1P00568 194 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ALOX5P09917 674 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 SLC35E2P0CK97 266 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 RNH1P13489 461 aaKnown RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 OSMP13725 252 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 POU2F1P14859 743 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 CHMP24386 653 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 CSNK1EP49674 416 aaKnown RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 TMBIM6P55061 237 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 C21orf59P57076 290 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 MVKQ03426 396 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 ILKQ13418 452 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 PIN1Q13526 163 aaPredicted RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 FAM53BQ14153 422 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 PTGES3Q15185 160 aaKnown RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 SMN1Q16637 294 aaKnown RBP11□□□□□ -0.65
SMAD3-202ENST00000439724 DEFB133Q30KQ1 61 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 INAVAQ3KP66 663 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 WDR45BQ5MNZ6 344 aa11□□□□□ -0.65
SMAD3-202ENST00000439724 GARNL3Q5VVW2 1013 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms