RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 AFF3P51826 1226 aaKnown RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 CCDC71Q8IV32 467 aaPredicted RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 OR2M4Q96R27 311 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.2
PTPN13-203ENST00000427191 MAN2C1Q9NTJ4 1040 aa13.77□□□□□ -0.2
PTPN13-203ENST00000427191 SERPINE2P07093 398 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 OR12D1P0DN82 309 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 C6P13671 934 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 CHRNA4P43681 627 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 GALNT1Q10472 559 aaPredicted RBP13.77□□□□□ -0.21
PTPN13-203ENST00000427191 SOWAHAQ2M3V2 549 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 FAM205BPQ63HN1 556 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 FAM83FQ8NEG4 500 aaPredicted RBP13.77□□□□□ -0.21
PTPN13-203ENST00000427191 DAZAP1Q96EP5 407 aaKnown RBP13.77□□□□□ -0.21
PTPN13-203ENST00000427191 OR8D2Q9GZM6 311 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 RPS10P5Q9NQ39 176 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 B3GNT3Q9Y2A9 372 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 MST1RQ04912 1400 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 GRXCR1A8MXD5 290 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 FMO6PO60774 539 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 CLN5O75503 358 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 UPK1BO75841 260 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 SLC22A5O76082 557 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 ACRV1P26436 265 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 DUSP7Q16829 419 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 IDO2Q6ZQW0 420 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM74Q96NL1 305 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 SLC45A1Q9Y2W3 748 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 LYRM1O43325 122 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 TOXO94900 526 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 CD63P08962 238 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 FASLGP48023 281 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 PREPP48147 710 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 MS4A13Q5J8X5 152 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 KIAA1211LQ6NV74 962 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 SPATC1Q76KD6 591 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 OR1S1Q8NH92 325 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 IRF7Q92985 503 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF681Q96N22 645 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 BEX2Q9BXY8 128 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 BEX1Q9HBH7 125 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 A6NLC8 198 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 UGDHO60701 494 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 DDCP20711 480 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 IRF4Q15306 451 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 LANCL3Q6ZV70 420 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF280BQ86YH2 543 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 TAAR8Q969N4 342 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 ERVK13-1Q9NX77 482 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 TEX10Q9NXF1 929 aaPredicted RBP13.77□□□□□ -0.21
PTPN13-203ENST00000427191 SAGE1Q9NXZ1 904 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 B3GNT2Q9NY97 397 aa13.77□□□□□ -0.21
PTPN13-203ENST00000427191 RTCAO00442 366 aaKnown RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CLDN7O95471 211 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 ADORA3P0DMS8 318 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CNN3Q15417 329 aaKnown RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF805Q5CZA5 627 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 PIM3Q86V86 326 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 DEFB126Q9BYW3 111 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 J3KR12 359 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 ALDOBP05062 364 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 HSD17B1P14061 328 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 JUPP14923 745 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 LMO2P25791 158 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 RBMS1P29558 406 aaKnown RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 RAB28P51157 221 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 TAS2R46P59540 309 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 MC2RQ01718 297 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 FPGSQ05932 587 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 TMEM236Q5W0B7 351 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 BLOC1S3Q6QNY0 202 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 PRELID3BQ9Y3B1 194 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 A0A087WUU8 490 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 hCG_1807616A0A1W2PRN6 198 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 C1GALT1C1LP0DN25 315 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 GAAP10253 952 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 LRIT3Q3SXY7 679 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CNIH3Q8TBE1 160 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 C14orf119Q9NWQ9 140 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 ZNF225Q9UK10 706 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 POU2F3Q9UKI9 436 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CASC3O15234 703 aaKnown RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 PKLRP30613 574 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 WNT4P56705 351 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 NOXA1Q86UR1 476 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 OR7G1Q8NGA0 311 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CACNG2Q9Y698 323 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 EIF2B1Q14232 305 aaKnown RBP13.76□□□□□ -0.21
PTPN13-203ENST00000427191 GPR176Q14439 515 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 PLGLAQ15195 96 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 KLBQ86Z14 1044 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 EGFL6Q8IUX8 553 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 NANPQ8TBE9 248 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CD8B2A6NJW9 211 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 BOLA2-SMG1P6H3BVE0 249 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CD8BP10966 210 aa13.76□□□□□ -0.21
PTPN13-203ENST00000427191 CAV2P51636 162 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms