RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SYT16Q17RD7 645 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 FBXL19-AS1Q494R0 122 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CCDC183Q5T5S1 534 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ATPAF1Q5TC12 328 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 FRMPD2BQ6IN97 320 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 TTC23LQ6PF05 361 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 PAPD4Q6PIY7 484 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 C12orf54Q6X4T0 127 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 LANCL3Q6ZV70 420 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CYP4Z2PQ8N1L4 340 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SLC25A41Q8N5S1 370 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 C2orf73Q8N5S3 287 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 MAPK1IP1LQ8NDC0 245 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ERP27Q96DN0 273 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 IMP4Q96G21 291 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 TIGD1Q96MW7 591 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ZNF285Q96NJ3 590 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 DACH2Q96NX9 599 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 MOGAT1Q96PD6 335 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 PRR25Q96S07 402 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 NPAS2Q99743 824 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 VN1R1Q9GZP7 353 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 DRC3Q9H069 523 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CXorf56Q9H5V9 222 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 MRPL47Q9HD33 250 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SELENONQ9NZV5 590 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 STOX2Q9P2F5 926 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ZNF629Q9UEG4 869 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 RWDD2AQ9UIY3 292 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 ERVK-11Q9UQG0 969 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 CUBNO60494 3623 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.46□□□□□ -1.75e-33■■■■■ 63.2
SFXN1-202ENST00000421887 CR1P17927 2039 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 SCN3AQ9NY46 2000 aa4.46□□□□□ -1.7
SFXN1-202ENST00000421887 HRNRQ86YZ3 2850 aaPredicted RBP4.46□□□□□ -1.7
SFXN1-202ENST00000421887 LOC105369274A0A096LPK9 316 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 A0A0A6YYC8 382 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 LOC102723532A0A0G2JNH3 316 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 B9A039 149 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 I3L1I5 382 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CTSVO60911 334 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 COQ9O75208 318 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 FTH1P02794 183 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 TPM2P07951 284 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PEBP1P30086 187 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PKLRP30613 574 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CPA2P48052 419 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 NR1H2P55055 460 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 NAP1L1P55209 391 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ATP5J2P56134 94 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 WNT3P56703 355 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 MAT1AQ00266 395 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PSG6Q00889 435 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PPIDQ08752 370 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ZBTB17Q13105 803 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PKP1Q13835 747 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PTK6Q13882 451 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 EFR3AQ14156 821 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PIGHQ14442 188 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ABRAXAS2Q15018 415 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PAFAH1B3Q15102 231 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SF3B4Q15427 424 aaKnown RBP eCLIP4.45□□□□□ -1.75e-9■■■□□ 14.6
SFXN1-202ENST00000421887 SIX1Q15475 284 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 NSDHLQ15738 373 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 HADHQ16836 314 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CLEC12BQ2HXU8 276 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PRTGQ2VWP7 1150 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ZNF750Q32MQ0 723 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PDLIM3Q53GG5 364 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SFT2D3Q587I9 215 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 NDUFAF5Q5TEU4 345 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 GARNL3Q5VVW2 1013 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 NCBP2-AS2Q69YL0 99 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ITPRIPL1Q6GPH6 555 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 RTL6Q6ICC9 239 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 LRRC8BQ6P9F7 803 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ZDHHC24Q6UX98 284 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 RANBP10Q6VN20 620 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 PLEKHM3Q6ZWE6 761 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CYP4V2Q6ZWL3 525 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ANKRD37Q7Z713 158 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CPOQ8IVL8 374 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 MAP7D3Q8IWC1 876 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CCDC28AQ8IWP9 274 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 OR4N4Q8N0Y3 316 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 CSNK1A1LQ8N752 337 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 AMER3Q8N944 861 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 RELL2Q8NC24 303 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 KCTD6Q8NC69 237 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SPATA22Q8NHS9 363 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SGMS2Q8NHU3 365 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 TMEM171Q8WVE6 324 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ROBO4Q8WZ75 1007 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ELMO1Q92556 727 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 HTRA1Q92743 480 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ZMYND19Q96E35 227 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ZBED6CLQ96FA7 236 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 C10orf90Q96M02 699 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms