RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 TMEM225Q6GV28 225 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 LRFN4Q6PJG9 635 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 PIWIL3Q7Z3Z3 882 aaKnown RBP12.34□□□□□ -0.43
RNF43-201ENST00000407977 FBXO27Q8NI29 283 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 ADAMTS18Q8TE60 1221 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 ADAMTS14Q8WXS8 1223 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 ZNF587Q96SQ5 575 aaPredicted RBP12.34□□□□□ -0.43
RNF43-201ENST00000407977 SORT1Q99523 831 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 MMP28Q9H239 520 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 GSTO2Q9H4Y5 243 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 BRF2Q9HAW0 419 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 ANKRD26Q9UPS8 1709 aa12.34□□□□□ -0.43
RNF43-201ENST00000407977 GPR37L1O60883 481 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 ALDH3B1P43353 468 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 SLC26A5P58743 744 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 MEF2AQ02078 507 aaPredicted RBP12.33□□□□□ -0.43
RNF43-201ENST00000407977 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.43
RNF43-201ENST00000407977 GALEQ14376 348 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 PCGF3Q3KNV8 242 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 PLBD1Q6P4A8 553 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 NT5C3BQ969T7 300 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 RBCK1Q9BYM8 510 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 POT1Q9NUX5 634 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 SERTAD3Q9UJW9 196 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 TMPRSS11EQ9UL52 423 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 SLC45A1Q9Y2W3 748 aa12.33□□□□□ -0.43
RNF43-201ENST00000407977 OR6C74A6NCV1 312 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 B4DGG1 531 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 HCRTR2O43614 444 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 RGS6P49758 472 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 LRP8Q14114 963 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 AMZ1Q400G9 498 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 PSAPL1Q6NUJ1 521 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 COMTD1Q86VU5 262 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 LRRC15Q8TF66 581 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 SORCS1Q8WY21 1168 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 KCNJ16Q9NPI9 418 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TRAV18A0A075B6X5 111 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 UBFD1O14562 309 aaKnown RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 RPS15AP62244 130 aaKnown RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 EMX1Q04741 257 aaPredicted RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 FGL2Q14314 439 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 KIAA1211LQ6NV74 962 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 RANBP10Q6VN20 620 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 SHFQ7M4L6 423 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 UTP4Q969X6 686 aaKnown RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 SLC12A9Q9BXP2 914 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 OR51E2Q9H255 320 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 SRA1Q9HD15 236 aaKnown RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 INPP5EQ9NRR6 644 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 FBXL12Q9NXK8 326 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 IRS2Q9Y4H2 1338 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 PRAMEF2O60811 474 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 DLSTP36957 453 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TLE3Q04726 772 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 PPA1Q15181 289 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 FAM182AQ5T1J6 154 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TAS1R3Q7RTX0 852 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 SLC7A5P1Q8MH63 180 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 OR52E2Q8NGJ4 325 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TBC1D15Q8TC07 691 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 MALSU1Q96EH3 234 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 PGAM5Q96HS1 289 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 ALG8Q9BVK2 526 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 ARHGAP39Q9C0H5 1083 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 C19orf12Q9NSK7 152 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 ALKBH4Q9NXW9 302 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 MRPL15Q9P015 296 aaKnown RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 SPDEFO95238 335 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 RAB3DO95716 219 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 ADORA3P0DMS8 318 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 GNSP15586 552 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 GPR4P46093 362 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 MEF2DQ14814 521 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 BCL2A1Q16548 175 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 ATAD3CQ5T2N8 411 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 ZNF691Q5VV52 312 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TRIM46Q7Z4K8 759 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 WDR20Q8TBZ3 569 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 CIDECQ96AQ7 238 aaPredicted RBP12.33□□□□□ -0.44
RNF43-201ENST00000407977 OR8D2Q9GZM6 311 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 HOXD1Q9GZZ0 328 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 THSD1Q9NS62 852 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 PLAGL1Q9UM63 463 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 TMEM98Q9Y2Y6 226 aa12.33□□□□□ -0.44
RNF43-201ENST00000407977 RNASET2O00584 256 aaKnown RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 F2P00734 622 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 MAS1P04201 325 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 LAMP1P11279 417 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 MAGEA3P43357 314 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 RAP2BP61225 183 aa12.32□□□□□ -0.44
RNF43-201ENST00000407977 MRPL49Q13405 166 aaKnown RBP12.32□□□□□ -0.44
RNF43-201ENST00000407977 PAGE3Q5JUK9 113 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms