RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 POU2F1P14859 743 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 RHCEP18577 417 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 CAV3P56539 151 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 VSX2P58304 361 aaPredicted RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 SP140Q13342 867 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 RGNQ15493 299 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 CCDC85BQ15834 202 aaPredicted RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 GGTA1PQ4G0N0 100 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 RAET1GQ6H3X3 334 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 LRRC28Q86X40 367 aaPredicted RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 CMIPQ8IY22 773 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 SCARB1Q8WTV0 552 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 TTYH1Q9H313 450 aaPredicted RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 NMNAT1Q9HAN9 279 aaPredicted RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 MRPS18AQ9NVS2 196 aaKnown RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 ACTR10Q9NZ32 417 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 EXTL2Q9UBQ6 330 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 CBLCQ9ULV8 474 aa17.82■□□□□ 0.44
HOXC6-202ENST00000394331 PPIEQ9UNP9 301 aaKnown RBP17.82■□□□□ 0.44
HOXC6-202ENST00000394331 C1orf226A1L170 272 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 GADD45GO95257 159 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 PDYNP01213 254 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 RPIAP49247 311 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 C6orf132Q5T0Z8 1188 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 TXNDC8Q6A555 127 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 KANSL1Q7Z3B3 1105 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 STPG2Q8N412 459 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 OR2T35Q8NGX2 323 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 ABCG4Q9H172 646 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 ZSCAN32Q9NX65 697 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 ARL15Q9NXU5 204 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 YARS2Q9Y2Z4 477 aaKnown RBP17.81■□□□□ 0.44
HOXC6-202ENST00000394331 PRAMEF25A6NGN4 478 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 SLC28A2O43868 658 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 CXCL10P02778 98 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 FCER2P06734 321 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 LPLP06858 475 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 NUDT7P0C024 238 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 DRD2P14416 443 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 ETV5P41161 510 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 RPL35P42766 123 aaKnown RBP17.81■□□□□ 0.44
HOXC6-202ENST00000394331 WDR5P61964 334 aaKnown RBP17.81■□□□□ 0.44
HOXC6-202ENST00000394331 ZXDBP98169 803 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 HEPACAMQ14CZ8 416 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 UGT8Q16880 541 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 TCEAL8Q8IYN2 117 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 ADGRG2Q8IZP9 1017 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 FAM26EQ8N5C1 309 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 CAMKVQ8NCB2 501 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 OR2AP1Q8NGE2 309 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 OR4D10Q8NGI6 311 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 OR5M3Q8NGP4 307 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 HSD17B8Q92506 261 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 TMEM169Q96HH4 297 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 COPS8Q99627 209 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 C11orf16Q9NQ32 467 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 BTNL2Q9UIR0 455 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 KCND3Q9UK17 655 aa17.81■□□□□ 0.44
HOXC6-202ENST00000394331 HRGP04196 525 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 MPPE1Q53F39 396 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 SPOUT1Q5T280 376 aaKnown RBP17.8■□□□□ 0.44
HOXC6-202ENST00000394331 PDSS1Q5T2R2 415 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 SLC27A4Q6P1M0 643 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 CASP12Q6UXS9 341 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 TPRG1Q6ZUI0 275 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 NAXDQ8IW45 347 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 ARIH2OSQ8N7S6 290 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 GPR26Q8NDV2 337 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 LCORQ96JN0 433 aaPredicted RBP17.8■□□□□ 0.44
HOXC6-202ENST00000394331 C7orf50Q9BRJ6 194 aaKnown RBP17.8■□□□□ 0.44
HOXC6-202ENST00000394331 TMPRSS13Q9BYE2 586 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 ZNF334Q9HCZ1 680 aaPredicted RBP17.8■□□□□ 0.44
HOXC6-202ENST00000394331 ZFR2Q9UPR6 939 aaKnown RBP17.8■□□□□ 0.44
HOXC6-202ENST00000394331 INSL5Q9Y5Q6 135 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 SMIM30A4D0T7 59 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 LANCL1O43813 399 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 ELK1P19419 428 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 GALP22466 123 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 CD96P40200 585 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 LMAN2Q12907 356 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 CPSF6Q16630 551 aaKnown RBP eCLIP17.8■□□□□ 0.44
HOXC6-202ENST00000394331 CEACAM20Q6UY09 585 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 C17orf107Q6ZR85 190 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 LRRC70Q7Z2Q7 622 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 TSPAN33Q86UF1 283 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 TET1Q8NFU7 2136 aa17.8■□□□□ 0.44
HOXC6-202ENST00000394331 NPIPB15A6NHN6 443 aaPredicted RBP17.79■□□□□ 0.44
HOXC6-202ENST00000394331 ZP1P60852 638 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 SNRPD1P62314 119 aaKnown RBP17.79■□□□□ 0.44
HOXC6-202ENST00000394331 ST3GAL2Q16842 350 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 CRTC1Q6UUV9 634 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 MBOAT1Q6ZNC8 495 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 NLRC3Q7RTR2 1065 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 CPXM2Q8N436 756 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 SELENOMQ8WWX9 145 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 FN3KQ9H479 309 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 IL21Q9HBE4 155 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 FGF20Q9NP95 211 aaPredicted RBP17.79■□□□□ 0.44
HOXC6-202ENST00000394331 ENAMQ9NRM1 1142 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 ENPP4Q9Y6X5 453 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms