RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 MENTQ9BUN1 341 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 NDEL1Q9GZM8 345 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 OR1A2Q9Y585 309 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 NUP210Q8TEM1 1887 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 PRODHO43272 600 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF24P17028 368 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 DDX5P17844 614 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 MYL9P24844 172 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 MNX1P50219 401 aaPredicted RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TAS2R38P59533 333 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ELAVL3Q14576 367 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF234Q14588 700 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 C3orf38Q5JPI3 329 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC30A6Q6NXT4 461 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC27A4Q6P1M0 643 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ASCC1Q8N9N2 400 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TMIEQ8NEW7 156 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 ANKK1Q8NFD2 765 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 WFIKKN2Q8TEU8 576 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 TMEM246Q9BRR3 403 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 NDRG2Q9UN36 371 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
GAPVD1-205ENST00000394084 A0A0A6YYD5 115 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 EDDM13A0A1B0GTR0 161 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 FAM172BPA6NC97 362 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 HMX3A6NHT5 357 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 B4DXG7 233 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ERI3O43414 337 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ERGP11308 486 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ACADMP11310 421 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ACP5P13686 325 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 KIR2DL3P43628 341 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 AVPR1BP47901 424 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 BNC1Q01954 994 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 DMPKQ09013 629 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 DBPQ10586 325 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ASAH1Q13510 395 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 KIAA1161Q6NSJ0 714 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF730Q6ZMV8 503 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 BBS10Q8TAM1 723 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 FGF11Q92914 225 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 OTULINQ96BN8 352 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 C12orf66Q96MD2 445 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 SNX18Q96RF0 628 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 SF3B6Q9Y3B4 125 aaKnown RBP13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ATG4BQ9Y4P1 393 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 DOCK9Q9BZ29 2069 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 A0A0B4J293 547 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 IGKV1-8A0A0C4DH67 115 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 CARNS1A5YM72 827 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 PLA2G10O15496 165 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 UBXN7O94888 489 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 FGF19O95750 216 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 RPN2P04844 631 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 LIMS3P0CW19 117 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 LIMS4P0CW20 117 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 P2RY2P41231 377 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 MAN2A2P49641 1150 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 CDK3Q00526 305 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF311Q5JNZ3 666 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ENTPD8Q5MY95 495 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 METRNLQ641Q3 311 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 CD300LDQ6UXZ3 194 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF513Q8N8E2 541 aaPredicted RBP13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 LILRB4Q8NHJ6 448 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 ENKURQ8TC29 256 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 RNF31Q96EP0 1072 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 SEMA4GQ9NTN9 838 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC13A4Q9UKG4 626 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 CLCA2Q9UQC9 943 aa13.11□□□□□ -0.31
GAPVD1-205ENST00000394084 LRIT2A6NDA9 550 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 HPGDSO60760 199 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 ADH1CP00326 375 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 GNSP15586 552 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 EFNB1P98172 346 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 CHRNEQ04844 493 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 RAB40BQ12829 278 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 RPA4Q13156 261 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 ARHGAP19Q14CB8 494 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 PAMR1Q6UXH9 720 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 QSOX2Q6ZRP7 698 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 RRM2BQ7LG56 351 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 SPRED2Q7Z698 418 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 IL17RCQ8NAC3 791 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 SLC7A6Q92536 515 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 CNRIP1Q96F85 164 aaPredicted RBP13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 COX14Q96I36 57 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 SPATA5L1Q9BVQ7 753 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 CHD7Q9P2D1 2997 aa13.1□□□□□ -0.31
GAPVD1-205ENST00000394084 CDH23Q9H251 3354 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms