RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 RAET1LQ5VY80 246 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 Q6ZRG5 221 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 RBPMS2Q6ZRY4 209 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 CHST3Q7LGC8 479 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRPV3Q8NET8 790 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 GOLGA5Q8TBA6 731 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 FNDC8Q8TC99 324 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 TMEM158Q8WZ71 300 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 NOL4LQ96MY1 436 aaPredicted RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 NUSAP1Q9BXS6 441 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 ZNF230Q9UIE0 474 aaPredicted RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 EMCNQ9ULC0 261 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 YTHDF2Q9Y5A9 579 aaKnown RBP0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 DOCK9Q9BZ29 2069 aa0.18□□□□□ -2.38
RNU6-239P-201ENST00000390990 NOTCH1P46531 2555 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PPIAL4EA0A075B759 164 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 A0A0A6YYD4 124 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PPIAL4CA0A0B4J2A2 164 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRBC2A0A5B9 178 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 A8MUA0 341 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 MEI4A8MW99 385 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PPIAL4DF5H284 164 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 RPL36A-HNRNPH2H7BZ11 118 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 GFYI3L273 518 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 FCGR3BO75015 233 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 BEST1O76090 585 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PGM3O95394 542 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 GBAP04062 536 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PPIAL4FP0DN26 164 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PORP16435 677 aaPredicted RBP0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PSMA3P25788 255 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 SAA4P35542 130 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRIM23P36406 574 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 GP5P40197 560 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 KRTAP12-1P59990 96 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 RPL32P62910 135 aaKnown RBP0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 MEF2DQ14814 521 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 SYPL1Q16563 259 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 CCDC57Q2TAC2 916 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 C1orf189Q5VU69 101 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 ARSKQ6UWY0 536 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 Q6ZR03 302 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 TMEM26Q6ZUK4 368 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 CYP4V2Q6ZWL3 525 aaPredicted RBP0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 NEGR1Q7Z3B1 354 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 LUZP1Q86V48 1076 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 SMARCD2Q92925 531 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 HAVCR1Q96D42 359 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PELI1Q96FA3 418 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 CHCHD6Q9BRQ6 235 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 GPR174Q9BXC1 333 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 NARFLQ9H6Q4 476 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 SIRT7Q9NRC8 400 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 TBC1D29Q9UFV1 150 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 GGA2Q9UJY4 613 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 BARX2Q9UMQ3 279 aaPredicted RBP0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 ATG4BQ9Y4P1 393 aa0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 PRRC2BQ5JSZ5 2229 aaKnown RBP0.17□□□□□ -2.38
RNU6-239P-201ENST00000390990 FGD5Q6ZNL6 1462 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 PFASO15067 1338 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 MAP3K15Q6ZN16 1313 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 TUBAL3A6NHL2 446 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 GJE1A6NN92 205 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 C16orf90A8MZG2 172 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 M0R296 226 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 BET1O15155 118 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 TSPAN2O60636 221 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 IGHV3-48P01763 117 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 NUDT17P0C025 328 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 EZRP15311 586 aaKnown RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 LGALS3P17931 250 aaKnown RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 UQCRC2P22695 453 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 TKTL1P51854 596 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 APOC4P55056 127 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 MTTPP55157 894 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 HAND2P61296 217 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 OC90Q02509 493 aaPredicted RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 MEF2CQ06413 473 aaPredicted RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 PUDPQ08623 228 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 IL18R1Q13478 541 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 UGCGQ16739 394 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 DNAJC21Q5F1R6 531 aaKnown RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 PAGE3Q5JUK9 113 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 PM20D1Q6GTS8 502 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 SNRNP48Q6IEG0 339 aaKnown RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 CREBRFQ8IUR6 639 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 PI4KAP1Q8N8J0 262 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 OR2AP1Q8NGE2 309 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 C18orf25Q96B23 403 aaPredicted RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 EVI5LQ96CN4 794 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 LHX9Q9NQ69 397 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 GDF3Q9NR23 364 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 TRMT6Q9UJA5 497 aaKnown RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 VPS28Q9UK41 221 aa0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 COL5A3P25940 1745 aaPredicted RBP0.16□□□□□ -2.38
RNU6-239P-201ENST00000390990 AFF2P51816 1311 aa0.15□□□□□ -2.38
RNU6-239P-201ENST00000390990 FLG2Q5D862 2391 aaPredicted RBP0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 IGLV1-50A0A075B6I6 118 aa0.15□□□□□ -2.39
RNU6-239P-201ENST00000390990 TMEM110-MUSTN1A8MSY1 372 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms