RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 BICRALQ6AI39 1079 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 KIAA1161Q6NSJ0 714 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 LAPTM4BQ86VI4 370 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 DCUN1D3Q8IWE4 304 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TP53I13Q8NBR0 393 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 SMRP1Q8NCR6 262 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 OR7G3Q8NG95 312 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TMEM163Q8TC26 289 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 RAD51AP1Q96B01 352 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 CREB3L1Q96BA8 519 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 WDR34Q96EX3 536 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TSSK6Q9BXA6 273 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ZNF576Q9H609 170 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PHPT1Q9NRX4 125 aaPredicted RBP8.44□□□□□ -1.06
GPNMB-202ENST00000381990 REV1Q9UBZ9 1251 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 SLC23A2Q9UGH3 650 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 TEKT2Q9UIF3 430 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 RAB23Q9ULC3 237 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PRELID1Q9Y255 219 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ASF1AQ9Y294 204 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 ASB4Q9Y574 426 aa8.44□□□□□ -1.06
GPNMB-202ENST00000381990 PRAMEF33A0A0G2JMD5 474 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 TRBC2A0A5B9 178 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SGK494L7N484 410 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 FAAHO00519 579 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SLC30A4O14863 429 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PLD2O14939 933 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 LYRM1O43325 122 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PLRG1O43660 514 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PRAMEF10O60809 474 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PAK4O96013 591 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 FAM157BP0CG42 384 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 NR2F6P10588 404 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 KELP23276 732 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 ZNF763Q0D2J5 394 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 DDX39BQ13838 428 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 FGL2Q14314 439 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 GANABQ14697 944 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SF3A2Q15428 464 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 C3orf38Q5JPI3 329 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 METRNLQ641Q3 311 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 MED27Q6P2C8 311 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PAMR1Q6UXH9 720 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 TMPRSS11BQ86T26 416 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 RNF175Q8N4F7 328 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 FAM26EQ8N5C1 309 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 TFGQ92734 400 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 KCNJ15Q99712 375 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 EFCAB11Q9BUY7 163 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 KATNB1Q9BVA0 655 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PPP1R3EQ9H7J1 279 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 NT5DC2Q9H857 520 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 C12orf10Q9HB07 376 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 DNAJC27Q9NZQ0 273 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 NDRG2Q9UN36 371 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 HSPB11Q9Y547 144 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PCM1Q15154 2024 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 TMEM129A0AVI4 362 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PI15O43692 258 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 RPN2P04844 631 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 C1GALT1C1LP0DN25 315 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 HOXB2P14652 356 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 ARSBP15848 533 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 POLR2CP19387 275 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 XKP51811 444 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 WNT4P56705 351 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SMIM11AP58511 58 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 HOXC5Q00444 222 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 ALDH6A1Q02252 535 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 TSTA3Q13630 321 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 CDONQ4KMG0 1287 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 KLHL22Q53GT1 634 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 ZBTB37Q5TC79 503 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 C22orf42Q6IC83 251 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 HDDC2Q7Z4H3 204 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 ANKK1Q8NFD2 765 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 NLGN4YQ8NFZ3 816 aaPredicted RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 OR14C36Q8NHC7 312 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SETD7Q8WTS6 366 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 AKAP1Q92667 903 aaKnown RBP eCLIP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 MTERF3Q96E29 417 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SLC6A18Q96N87 628 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 C1QTNF7Q9BXJ2 289 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 POLDIP3Q9BY77 421 aaKnown RBP8.43□□□□□ -1.06
GPNMB-202ENST00000381990 FOLH1BQ9HBA9 442 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 PTTG3PQ9NZH4 202 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 ADAM30Q9UKF2 790 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SCML1Q9UN30 329 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 SPEF1Q9Y4P9 236 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 OR1A2Q9Y585 309 aa8.43□□□□□ -1.06
GPNMB-202ENST00000381990 A0A1W2PQF6 199 aa8.42□□□□□ -1.06
GPNMB-202ENST00000381990 A0A1W2PQU0 124 aa8.42□□□□□ -1.06
GPNMB-202ENST00000381990 SNTNA6NMZ2 147 aa8.42□□□□□ -1.06
GPNMB-202ENST00000381990 LEUTXA8MZ59 168 aa8.42□□□□□ -1.06
GPNMB-202ENST00000381990 H3BN98 237 aa8.42□□□□□ -1.06
GPNMB-202ENST00000381990 PDPK1O15530 556 aa8.42□□□□□ -1.06
GPNMB-202ENST00000381990 GPR37L1O60883 481 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms