RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 WDR5BQ86VZ2 330 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 KDM4BO94953 1096 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 VEGFCP49767 419 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 METTL21AQ8WXB1 218 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MON2Q7Z3U7 1717 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 C7orf72A4D263 438 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 LRRC25Q8N386 305 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SLC15A4Q8N697 577 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 F2RL3Q96RI0 385 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF217O75362 1048 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 RGS9O75916 674 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 BDKRB1P46663 353 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SPACA1Q9HBV2 294 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NDUFB11Q9NX14 153 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 DOLKQ9UPQ8 538 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 EIF1BO60739 113 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 JTBO76095 146 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CCR9P51686 369 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PDSS1Q5T2R2 415 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZMIZ2Q8NF64 920 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 KCPQ6ZWJ8 1503 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZBTB42B2RXF5 422 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NRP1O14786 923 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SIRPAP78324 504 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GPR157Q5UAW9 335 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CLCC1Q96S66 551 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NEURL2Q9BR09 285 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF281Q9Y2X9 895 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 OR2A25A4D2G3 310 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 LYRM1O43325 122 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TSC22D2O75157 780 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 OPRD1P41143 372 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MAP3K8P41279 467 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 RAP1GAP2Q684P5 730 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 WDR48Q8TAF3 677 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 A0A1W2PQL4 384 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 KRBA1A5PL33 1030 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SPANXN4Q5MJ08 99 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 Q6ZSR9 355 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SPATC1Q76KD6 591 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PRSS35Q8N3Z0 413 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 COQ8AQ8NI60 647 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 KCNG3Q8TAE7 436 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 RNF141Q8WVD5 230 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TEX10Q9NXF1 929 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF821O75541 412 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CELF2O95319 508 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 APODP05090 189 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GJB1P08034 283 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MAGP20916 626 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GZMKP49863 264 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NCS1P62166 190 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 DSC2Q02487 901 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TSTA3Q13630 321 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PEA15Q15121 130 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF227Q86WZ6 799 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PEBP4Q96S96 227 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D3DA0A087WVF3 549 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NCF1BA6NI72 391 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NCF1CA8MVU1 366 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D3LB9A6J9 549 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D3HP0C7X1 549 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PRAMEF14Q5SWL7 426 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 HES5Q5TA89 166 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PRAMEF13Q5VWM6 474 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D3CQ6IPX1 549 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SLC18B1Q6NT16 456 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 HMBOX1Q6NT76 420 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D3Q8IZP1 549 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GTPBP8Q8N3Z3 284 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GLIS1Q8NBF1 620 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GAL3ST3Q96A11 431 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ELP4Q96EB1 424 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PKP4Q99569 1192 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MCOLN1Q9GZU1 580 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GABRR3A8MPY1 467 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CX3CR1P49238 355 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 AGERQ15109 404 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MPEG1Q2M385 716 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SLC22A25Q6T423 547 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CD163Q86VB7 1156 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 OR6S1Q8NH40 331 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TMPRSS13Q9BYE2 586 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 IFT46Q9NQC8 304 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TVP23BQ9NYZ1 205 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MTHFD2P13995 350 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CLEC6AQ6EIG7 209 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 OR2L13Q8N349 312 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 WDSUB1Q8N9V3 476 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TESQ9UGI8 421 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GBAP04062 536 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PPM1FP49593 454 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PAQR7Q86WK9 346 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NDOR1Q9UHB4 597 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CLCA3PQ9Y6N3 262 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 C1QAP02745 245 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 IFNGR1P15260 489 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF823P16415 610 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms