RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 DCLRE1CQ96SD1 692 aaKnown RBP10.46□□□□□ -0.73
CCDC40-203ENST00000374877 TMEM43Q9BTV4 400 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ABCG4Q9H172 646 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 SLAMF7Q9NQ25 335 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 SPHK2Q9NRA0 654 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 ZSCAN32Q9NX65 697 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 FBXW2Q9UKT8 454 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 PPIL1Q9Y3C6 166 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 SPEF1Q9Y4P9 236 aa10.46□□□□□ -0.73
CCDC40-203ENST00000374877 NUP210Q8TEM1 1887 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-203ENST00000374877 FOXE1O00358 373 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-203ENST00000374877 POP4O95707 220 aaKnown RBP10.46□□□□□ -0.74
CCDC40-203ENST00000374877 CELP19835 753 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 POU3F3P20264 500 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-203ENST00000374877 GABRA5P31644 462 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 MAPK12P53778 367 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 PNLIPRP1P54315 467 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 SMIM11AP58511 58 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 CSTF1Q05048 431 aaKnown RBP10.46□□□□□ -0.74
CCDC40-203ENST00000374877 CNTN1Q12860 1018 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 TPBGQ13641 420 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF284Q2VY69 593 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 BRAT1Q6PJG6 821 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 TMEM220Q6QAJ8 160 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 B3GLCTQ6Y288 498 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 ASB18Q6ZVZ8 466 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 NEIL3Q8TAT5 605 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.74
CCDC40-203ENST00000374877 DHRS9Q9BPW9 319 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 ACAT2Q9BWD1 397 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 EGLN3Q9H6Z9 239 aa10.46□□□□□ -0.74
CCDC40-203ENST00000374877 LOC105371267A0A1B0GV96 52 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 C2orf92A0A1B0GVN3 265 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SLC43A1O75387 559 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 OR12D1P0DN82 309 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 KCNJ5P48544 419 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 EVX1P49640 407 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SF3A2Q15428 464 aaKnown RBP10.45□□□□□ -0.74
CCDC40-203ENST00000374877 ESCO2Q56NI9 601 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 C6orf120Q7Z4R8 191 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 IL17RCQ8NAC3 791 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 XAGE5Q8WWM1 108 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 ZNF607Q96SK3 696 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 GPA33Q99795 319 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 MARVELD1Q9BSK0 173 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 HLA-DQB1P01920 261 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 ACP2P11117 423 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 MTNR1AP48039 350 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SMSP52788 366 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 POLR2LP62875 67 aaKnown RBP10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SYPL1Q16563 259 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 FAM78AQ5JUQ0 283 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 CLEC12AQ5QGZ9 265 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 FAM205BPQ63HN1 556 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 TTC9Q92623 222 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 FGF13Q92913 245 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 EXOSC8Q96B26 276 aaKnown RBP10.45□□□□□ -0.74
CCDC40-203ENST00000374877 NEURL3Q96EH8 262 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 ATF6BQ99941 703 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 PLA2G12AQ9BZM1 189 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 A4GALTQ9NPC4 353 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 TRPC4Q9UBN4 977 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 A4GNTQ9UNA3 340 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 TMEM129A0AVI4 362 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 CD8B2A6NJW9 211 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 LEUTXA8MZ59 168 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 FABP7O15540 132 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 LZTS3O60299 673 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-203ENST00000374877 LALBAP00709 142 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 FAM157BP0CG42 384 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 CD8BP10966 210 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 HLA-FP30511 346 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 COL19A1Q14993 1142 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 GDPD4Q6W3E5 623 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 CHRDL2Q6WN34 429 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 KIAA0907Q7Z7F0 614 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-203ENST00000374877 TMEM25Q86YD3 366 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SLC5A11Q8WWX8 675 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 OTULINQ96BN8 352 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SENP5Q96HI0 755 aaPredicted RBP10.45□□□□□ -0.74
CCDC40-203ENST00000374877 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 DIABLOQ9NR28 239 aa10.45□□□□□ -0.74
CCDC40-203ENST00000374877 SLC5A10A0PJK1 596 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 BTN3A3O00478 584 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 LINC01565O15544 149 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 PRODHO43272 600 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 C1orf105O95561 183 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 CH25HO95992 272 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 RAB40BQ12829 278 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 MAP4K2Q12851 820 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 MZT2AQ6P582 158 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 SLC36A4Q6YBV0 504 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 COMTD1Q86VU5 262 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 CFAP206Q8IYR0 622 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 OR5D16Q8NGK9 328 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 TEX47Q8TBZ9 253 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 TREX2Q9BQ50 279 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-203ENST00000374877 S1PR5Q9H228 398 aa10.44□□□□□ -0.74
CCDC40-203ENST00000374877 NARFLQ9H6Q4 476 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms