RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CYP17A1P05093 508 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 HRH2P25021 359 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 TAP2Q03519 686 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 OR4C11Q6IEV9 310 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 OR5W2Q8NH69 310 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 KCNN1Q92952 543 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 SAMD8Q96LT4 415 aa15.13■□□□□ 0.01
COL17A1-202ENST00000369733 CPPED1Q9BRF8 314 aaPredicted RBP15.13■□□□□ 0.01
COL17A1-202ENST00000369733 A0A0G2JMP0 313 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SLC16A8O95907 504 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SPARCP09486 303 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SPINT3P49223 89 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 PRKXP51817 358 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 HYAL2Q12891 473 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ZMYND11Q15326 602 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 CRTC1Q6UUV9 634 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ZSCAN1Q8NBB4 408 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 OR4M2Q8NGB6 313 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SLC41A3Q96GZ6 507 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 HS6ST2Q96MM7 605 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 GPR62Q9BZJ7 368 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 RGCCQ9H4X1 137 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ZDHHC4Q9NPG8 344 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 GXYLT2A0PJZ3 443 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 GABRR3A8MPY1 467 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 E2F3O00716 465 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF208O43345 1280 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SC5DO75845 299 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 FARS2O95363 451 aaKnown RBP15.12■□□□□ 0.01
COL17A1-202ENST00000369733 PTH2RP49190 550 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SF3B4Q15427 424 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL17A1-202ENST00000369733 FRMPD2BQ6IN97 320 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 MAMDC4Q6UXC1 1216 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 CPOQ8IVL8 374 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 APCDD1Q8J025 514 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 OR7G3Q8NG95 312 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 TXNDC15Q96J42 360 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 PPA2Q9H2U2 334 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 RXFP3Q9NSD7 469 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 KCNN3Q9UGI6 736 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 DHDHQ9UQ10 334 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 AP1M2Q9Y6Q5 423 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 S1PR1P21453 382 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 GHRHRQ02643 423 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 CRYZQ08257 329 aaKnown RBP15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ITPRIPL2Q3MIP1 535 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 OR52E2Q8NGJ4 325 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 CENPOQ9BU64 300 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ARHGAP39Q9C0H5 1083 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 NT5DC2Q9H857 520 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 TAS2R8Q9NYW2 309 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 PSORS1C1Q9UIG5 152 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 ARHGAP33O14559 1287 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 B4GALT2O60909 372 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SFTPBP07988 381 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 HLA-EP13747 358 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 SSTR2P30874 369 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 RBMXP38159 391 aaKnown RBP15.12■□□□□ 0.01
COL17A1-202ENST00000369733 WDR5P61964 334 aaKnown RBP15.12■□□□□ 0.01
COL17A1-202ENST00000369733 LY6G5CQ5SRR4 150 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 NADSYN1Q6IA69 706 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM205Q6UW68 189 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 C5AR2Q9P296 337 aa15.12■□□□□ 0.01
COL17A1-202ENST00000369733 WASHC1A8K0Z3 465 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 WASH3PC4AMC7 463 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 CDC40O60508 579 aaKnown RBP eCLIP15.11■□□□□ 0.01
COL17A1-202ENST00000369733 PIGAP37287 484 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 GALEQ14376 348 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 CTSL3PQ5NE16 218 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 LAX1Q8IWV1 398 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 DPF3Q92784 378 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF726A6NNF4 738 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 PRAF2O60831 178 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 CATSPEREQ5SY80 951 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 DNAJC5GQ8N7S2 189 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 SORCS1Q8WY21 1168 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 EGLN2Q96KS0 407 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 ACSL5Q9ULC5 683 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 PCDHGA2Q9Y5H1 932 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM88BA6NKF7 163 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 RNF13O43567 381 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF623O75123 536 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 CSTBP04080 98 aaKnown RBP15.11■□□□□ 0.01
COL17A1-202ENST00000369733 CD34P28906 385 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 PDGFRLQ15198 375 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 TBPL2Q6SJ96 375 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 FAM86B1Q8N7N1 296 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 A0A1B0GTW7 788 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 F5H5P2 479 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 NUPL2O15504 423 aaKnown RBP15.11■□□□□ 0.01
COL17A1-202ENST00000369733 PTHP01270 115 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 PTPN6P29350 595 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 SLC46A3Q7Z3Q1 461 aa15.11■□□□□ 0.01
COL17A1-202ENST00000369733 TMEM173Q86WV6 379 aaPredicted RBP15.11■□□□□ 0.01
COL17A1-202ENST00000369733 LRRC25Q8N386 305 aaPredicted RBP15.11■□□□□ 0.01
COL17A1-202ENST00000369733 ZNF860A6NHJ4 632 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 EEF1E1-BLOC1S5C9J1V9 151 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 PLEKHN1Q494U1 663 aaPredicted RBP15.1■□□□□ 0.01
COL17A1-202ENST00000369733 PRRG4Q9BZD6 226 aa15.1■□□□□ 0.01
COL17A1-202ENST00000369733 CSNK1G3Q9Y6M4 447 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms