RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 EBPQ15125 230 aaKnown RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 MFSD12Q6NUT3 480 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 H3F3CQ6NXT2 135 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 JMJD6Q6NYC1 403 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 INO80CQ6PI98 192 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 GPR155Q7Z3F1 870 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 SZRD1Q7Z422 152 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 KBTBD2Q8IY47 623 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 CDRT4Q8N9R6 151 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 FBXO27Q8NI29 283 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 NUBPLQ8TB37 319 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 UBL7Q96S82 380 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 CPPED1Q9BRF8 314 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC39A3Q9BRY0 314 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 LMF2Q9BU23 707 aaKnown RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 ACTRT3Q9BYD9 372 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 FOLH1BQ9HBA9 442 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 GIN1Q9NXP7 522 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 DTX4Q9Y2E6 619 aa11.5□□□□□ -0.57
NIF3L1-201ENST00000359683 C2orf92A0A1B0GVN3 265 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ARGFXA6NJG6 315 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CT45A8P0DMV1 189 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CT45A9P0DMV2 189 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ITGAMP11215 1152 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 DRD5P21918 477 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC6A2P23975 617 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CPOXP36551 454 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 DCAF7P61962 342 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 TXNL4AP83876 142 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 PSG6Q00889 435 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 LASP1Q14847 261 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CT45A2Q5DJT8 189 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CDC73Q6P1J9 531 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC29A4Q7RTT9 530 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 RNF130Q86XS8 419 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 APLFQ8IW19 511 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ARMC10Q8N2F6 343 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ZNF441Q8N8Z8 693 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 C17orf47Q8NEP4 570 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 OR8J3Q8NGG0 315 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 OR52N2Q8NGI0 321 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 OR5L2Q8NGL0 311 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SNRNP27Q8WVK2 155 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 PSMF1Q92530 271 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 TP53INP1Q96A56 240 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC35G5Q96KT7 338 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 BTBD9Q96Q07 612 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SH3GL1Q99961 368 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 DEFB126Q9BYW3 111 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 WWTR1Q9GZV5 400 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ING2Q9H160 280 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 C1orf21Q9H246 121 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SERHL2Q9H4I8 314 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 IKZF5Q9H5V7 419 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 PRORYQ9H606 182 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 EQTNQ9NQ60 294 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 FAF1Q9UNN5 650 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 GPR55Q9Y2T6 319 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 DOCK10Q96BY6 2186 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 EVPLLA8MZ36 301 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ATP5HO75947 161 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SOX30O94993 753 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 NKX2-2O95096 273 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ACP2P11117 423 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 PSME3P61289 254 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC25A3Q00325 362 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SELPLGQ14242 412 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 RGNQ15493 299 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 DEFB109BQ30KR1 87 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 COX20Q5RI15 118 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 RINLQ6ZS11 566 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CLEC1AQ8NC01 280 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC16A11Q8NCK7 471 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 RBM15BQ8NDT2 890 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 PNPT1Q8TCS8 783 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC7A6OSQ96CW6 309 aaPredicted RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 SLC35A4Q96G79 324 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 THOC3Q96J01 351 aaKnown RBP11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 OR7D2Q96RA2 312 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 STACQ99469 402 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 YIPF4Q9BSR8 244 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 ITPAQ9BY32 194 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 PIGUQ9H490 435 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 RAD21L1Q9H4I0 556 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CPNE5Q9HCH3 593 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 NDE1Q9NXR1 346 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 TAS2R1Q9NYW7 299 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 CORO2BQ9UQ03 480 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 KCNMB2Q9Y691 235 aa11.49□□□□□ -0.57
NIF3L1-201ENST00000359683 C15orf38-AP3S2A0A0A6YYH1 394 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 DUXAA6NLW8 204 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 ASNA1O43681 348 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 HNRNPCL1O60812 293 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 PRB1P04280 392 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 BMP2P12643 396 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 CASP9P55211 416 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 TMPRSS3P57727 454 aa11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 RPS26P62854 115 aaKnown RBP11.48□□□□□ -0.57
NIF3L1-201ENST00000359683 ZNF155Q12901 538 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms