RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 C2orf15Q8WU43 125 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ACOT11Q8WXI4 607 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 MAL2Q969L2 176 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SLC25A36Q96CQ1 311 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 KCTD12Q96CX2 325 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 LRRC46Q96FV0 321 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 DOCK2Q92608 1830 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FDXRP22570 491 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SOX2P48431 317 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 IRF5Q13568 498 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 KIAA1211LQ6NV74 962 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 KCTD18Q6PI47 426 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 RASGRP3Q8IV61 690 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FAM86B1Q8N7N1 296 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 HAVCR2Q8TDQ0 301 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 MYLIPQ8WY64 445 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OR2AG1Q9H205 316 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 EPHA6Q9UF33 1036 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 GGT3PA6NGU5 568 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 PRSS3P35030 304 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 DUSP28Q4G0W2 176 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 NHSL2Q5HYW2 709 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 DPY19L2P1Q6NXN4 242 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM173Q86WV6 379 aaPredicted RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM145Q8NBT3 493 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OR2AP1Q8NGE2 309 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OR5W2Q8NH69 310 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 ANGPTL6Q8NI99 470 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 METTL21AQ8WXB1 218 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OCEL1Q9H607 264 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 LOC102723532A0A0G2JNH3 316 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 C7orf72A4D263 438 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 A8MVJ9 347 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OR12D1P0DN82 309 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 CHRNA6Q15825 494 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FOXB2Q5VYV0 432 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 MRPL41Q8IXM3 137 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 OR7G3Q8NG95 312 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 QRSL1Q9H0R6 528 aaKnown RBP8.36□□□□□ -1.07
COL6A6-201ENST00000358511 SRMSQ9H3Y6 488 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FZD8Q9H461 694 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 WDR26Q9H7D7 661 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 FBXO8Q9NRD0 319 aa8.36□□□□□ -1.07
COL6A6-201ENST00000358511 KLRG2A4D1S0 409 aaPredicted RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ADAM12O43184 909 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MT-ND4P03905 459 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 S100A8P05109 93 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PRKCGP05129 697 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ACPPP15309 386 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 TLE3Q04726 772 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MEF2DQ14814 521 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 GPR135Q8IZ08 494 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 RAB8BQ92930 207 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR2M4Q96R27 311 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 IL12RB2Q99665 862 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MCHR1Q99705 422 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM248Q9NWD8 314 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 SDHAF2Q9NX18 166 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 SAGE1Q9NXZ1 904 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 E2F3O00716 465 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 SCAMP1O15126 338 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 FHP07954 510 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 AK4P27144 223 aaPredicted RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CREB5Q02930 508 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PLEKHS1Q5SXH7 462 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CELF2-AS1Q8N7Q2 184 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR52B6Q8NGF0 335 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF558Q96NG5 402 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 NPY6RQ99463 290 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 DNTTIP1Q9H147 329 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 A0A1B0GV50 99 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CCKBRP32239 447 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PBX2P40425 430 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 NAA10P41227 235 aaPredicted RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR4D1Q15615 310 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 DUSP6Q16828 381 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 LRRC26Q2I0M4 334 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ALG10BQ5I7T1 473 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 GPR139Q6DWJ6 353 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 FBXL22Q6P050 247 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF585AQ6P3V2 769 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CXCL17Q6UXB2 119 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ZNF550Q7Z398 422 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 ZER1Q7Z7L7 766 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CLDN19Q8N6F1 224 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 OR2T11Q8NH01 316 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 CERKQ8TCT0 537 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 NUS1Q96E22 293 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 DHRS9Q9BPW9 319 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MAN2C1Q9NTJ4 1040 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 A3GALT2U3KPV4 340 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 LAMB2P55268 1798 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 TMEM221A6NGB7 291 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 HLA-AP01891 365 aaKnown RBP8.35□□□□□ -1.07
COL6A6-201ENST00000358511 MAS1P04201 325 aa8.35□□□□□ -1.07
COL6A6-201ENST00000358511 HFE2Q6ZVN8 426 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms