RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TNFAIP8L2Q6P589 184 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 INO80CQ6PI98 192 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 APOOLQ6UXV4 268 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 CCDC81Q6ZN84 652 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 NUP43Q8NFH3 380 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR10Q1Q8NGQ4 319 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 OR5P2Q8WZ92 322 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ZBED6CLQ96FA7 236 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 ZNF764Q96H86 408 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 LPAR4Q99677 370 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ARHGAP9Q9BRR9 750 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 TPT1P8Q9HAU6 139 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 ZCCHC3Q9NUD5 404 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 PTGFRNQ9P2B2 879 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 BCAP29Q9UHQ4 241 aa3.73□□□□□ -1.81
LIG4-201ENST00000356922 C19orf53Q9UNZ5 99 aaPredicted RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 WBP11Q9Y2W2 641 aaKnown RBP3.73□□□□□ -1.81
LIG4-201ENST00000356922 HELZ2Q9BYK8 2649 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 NSG1A0A0A6YYJ2 146 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NPIPA5A0A0B4J1W7 369 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 TRBV11-1A0A0K0K1C0 115 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 TTC36A6NLP5 189 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 TMEM229AB2RXF0 380 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NPIPA7E9PJI5 369 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PEX12O00623 359 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NME4O00746 187 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ANP32DO95626 131 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NPIPA8P0DM63 369 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 OR12D1P0DN82 309 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ERFP50548 548 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CLNS1AP54105 237 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 BNIP1Q12981 228 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 TP53BP2Q13625 1128 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SYPL1Q16563 259 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 LINC00303Q3SY05 128 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 MMEL1Q495T6 779 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SPDYE7PQ495Y7 208 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 RUNDC3AQ59EK9 446 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PLAG1Q6DJT9 500 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NIPAL1Q6NVV3 410 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 LYPD8Q6UX82 237 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 R3HCC1LQ7Z5L2 792 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 SLC15A3Q8IY34 581 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 DPP10Q8N608 796 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ZNF441Q8N8Z8 693 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 KDF1Q8NAX2 398 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 CATSPER1Q8NEC5 780 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 OR4C3Q8NH37 302 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 RP9Q8TA86 221 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 FAM110BQ8TC76 370 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ZNF675Q8TD23 568 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 THOC3Q96J01 351 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 VPS50Q96JG6 964 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ZNF583Q96ND8 569 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ANKRD27Q96NW4 1050 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CGREF1Q99674 301 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SLC35A5Q9BS91 424 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 HES7Q9BYE0 225 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 DPH1Q9BZG8 443 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ZNF552Q9H707 407 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 RUBCNLQ9H714 662 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 FAM120CQ9NX05 1096 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 BTNL2Q9UIR0 455 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NXT1Q9UKK6 140 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 ENTPD4Q9Y227 616 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PADI2Q9Y2J8 665 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 HEMK1Q9Y5R4 338 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 ASH1LQ9NR48 2969 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 GCN1Q92616 2671 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 ZNF407Q9C0G0 2248 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 RNF103-CHMP3A0A140T963 221 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PRORSD1PA6NEY8 169 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 B2RBV5 119 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CLIC1O00299 241 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 MRASO14807 208 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 ADAM11O75078 769 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 NADKO95544 446 aaPredicted RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 DDX5P17844 614 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 NUDT2P50583 147 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CXADRP78310 365 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CDC20Q12834 499 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SERTAD2Q14140 314 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 MAPK14Q16539 360 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 BROXQ5VW32 411 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SAXO2Q658L1 398 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 FAM91A1Q658Y4 838 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 MFSD12Q6NUT3 480 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 FIGNL1Q6PIW4 674 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 LINC00696Q6ZRV3 163 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 DHDDSQ86SQ9 333 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 PTOV1Q86YD1 416 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 OR5M3Q8NGP4 307 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 OR10A6Q8NH74 314 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SLC9A6Q92581 669 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 CDS1Q92903 461 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 UTP4Q969X6 686 aaKnown RBP3.72□□□□□ -1.81
LIG4-201ENST00000356922 TMEM125Q96AQ2 219 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 SIGLEC12Q96PQ1 595 aa3.72□□□□□ -1.81
LIG4-201ENST00000356922 GAL3ST4Q96RP7 486 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms