RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 PRDX1Q06830 199 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 GINS1Q14691 196 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 DCST1Q5T197 706 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 C22orf42Q6IC83 251 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 UNC5DQ6UXZ4 953 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ADAMTSL4Q6UY14 1074 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ACOT4Q8N9L9 421 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC16A11Q8NCK7 471 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 OR4F15Q8NGB8 312 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CXorf40AQ8TE69 158 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PATE1Q8WXA2 126 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 S100ZQ8WXG8 99 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 MTERF3Q96E29 417 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FAM46AQ96IP4 442 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 LRR1Q96L50 414 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF681Q96N22 645 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 RACGAP1Q9H0H5 632 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 POLR2J3Q9H1A7 115 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 MMP28Q9H239 520 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZCCHC3Q9NUD5 404 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SEC14L3Q9UDX4 400 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TBC1D29Q9UFV1 150 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF229Q9UJW7 825 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 MKLN1Q9UL63 735 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ANGPT4Q9Y264 503 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 KLK4Q9Y5K2 254 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 OR2W5A6NFC9 320 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FAM183AA6NL82 134 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 K7EQS6 105 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CCRL2O00421 344 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ERI3O43414 337 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 VEGFDO43915 354 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 LGI1O95970 557 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 EN2P19622 333 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 GIPRP48546 466 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SNRPGP62308 76 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FABP5Q01469 135 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CDC20Q12834 499 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SPHARQ15513 63 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TAB1Q15750 504 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 MAPK14Q16539 360 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FAM214AQ32MH5 1076 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 Q5BKY6 102 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ATAT1Q5SQI0 421 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 MRM1Q6IN84 353 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ABHD17CQ6PCB6 329 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PARM1Q6UWI2 310 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF765Q7L2R6 523 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 VN1R4Q7Z5H5 301 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 LHFPL3Q86UP9 236 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM255BQ8WV15 326 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 STARD8Q92502 1023 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC9A6Q92581 669 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC35A4Q96G79 324 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC7A5P2Q9GIP4 190 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 HOXD1Q9GZZ0 328 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 BTBD1Q9H0C5 482 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 MED20Q9H944 212 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ISG20L2Q9H9L3 353 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FGF22Q9HCT0 170 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC35C2Q9NQQ7 365 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 THAP10Q9P2Z0 257 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TSC22D4Q9Y3Q8 395 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FAM32AQ9Y421 112 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLCO1B1Q9Y6L6 691 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PCDH15Q96QU1 1955 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CACNA1IQ9P0X4 2223 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC35F4A4IF30 521 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 A8MVJ9 347 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 BTN3A3O00478 584 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PRKNO60260 465 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 KRT75O95678 551 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 OXSR1O95747 527 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 DLGAP3O95886 979 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ADH1CP00326 375 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 RB1P06400 928 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZGLP1P0C6A0 271 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 LIMS3P0CW19 117 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 LIMS4P0CW20 117 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TIE1P35590 1138 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 IGFALSP35858 605 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 BUD31P41223 144 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 CASP3P42574 277 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PPP1CAP62136 330 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 RACK1P63244 317 aaKnown RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 ZNF155Q12901 538 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SPDYE7PQ495Y7 208 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TMEM201Q5SNT2 666 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 SLC30A6Q6NXT4 461 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 PSRC1Q6PGN9 363 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-201ENST00000347613 DGAT2L6Q6ZPD8 337 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 IKBIPQ70UQ0 350 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 HDDC3Q8N4P3 179 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 C7orf57Q8NEG2 295 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 OR7G2Q8NG99 324 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 FLVCR1-AS1Q8TAF5 88 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 OTUB2Q96DC9 234 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 C10orf90Q96M02 699 aa5.67□□□□□ -1.5
CLCN3-201ENST00000347613 TRNT1Q96Q11 434 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms