RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 SPACA7Q96KW9 195 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ARHGDIGQ99819 225 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 QRSL1Q9H0R6 528 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 MTHFD2LQ9H903 347 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 UCKL1Q9NWZ5 548 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ENOPH1Q9UHY7 261 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 CDC14AQ9UNH5 594 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 CLCA2Q9UQC9 943 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 A0A1W2PRQ8 180 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PLOD3O60568 738 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 MRPS14O60783 128 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 FAM20BO75063 409 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SLITRK5O94991 958 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ZIC2O95409 532 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ADAP00813 363 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DCNP07585 359 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 IFI6P09912 130 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ACP2P11117 423 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 NT5EP21589 574 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 GABRA4P48169 554 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PDX1P52945 283 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 CRISP1P54107 249 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SH3BGRP55822 239 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 EMX1Q04741 257 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DGCR6Q14129 220 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PTGES3Q15185 160 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DUSP5Q16690 384 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PRICKLE4Q2TBC4 344 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 C14orf28Q4W4Y0 310 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 EXOSC6Q5RKV6 272 aaKnown RBP8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DHRS4L2Q6PKH6 230 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 VRK2Q86Y07 508 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DOK4Q8TEW6 326 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF285Q96NJ3 590 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 GUCD1Q96NT3 240 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 DOK1Q99704 481 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 FNDC11Q9BVV2 318 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 UCK2Q9BZX2 261 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 CCDC90BQ9GZT6 254 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 LHPPQ9H008 270 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PIGUQ9H490 435 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PLCXD1Q9NUJ7 323 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF226Q9NYT6 803 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 EPHA6Q9UF33 1036 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 PLCL2Q9UPR0 1127 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 SIT1Q9Y3P8 196 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 CHST2Q9Y4C5 530 aa8.97□□□□□ -0.97
TRIM55-201ENST00000276573 A0A0A6YYC8 382 aaPredicted RBP8.96□□□□□ -0.98
TRIM55-201ENST00000276573 SH3PXD2BA1X283 911 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 I3L1I5 382 aaPredicted RBP8.96□□□□□ -0.98
TRIM55-201ENST00000276573 FOXS1O43638 330 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 OR10H3O60404 316 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 SDC3O75056 442 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 PIAS2O75928 621 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 MED26O95402 600 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 SLC35E2P0CK97 266 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 ITIH1P19827 911 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 CHMP24386 653 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 KRT20P35900 424 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 C21orf59P57076 290 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 ILKQ13418 452 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 NDUFA9Q16795 377 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 MLIPQ5VWP3 458 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 ZCCHC12Q6PEW1 402 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 PODNL1Q6PEZ8 512 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 FRRS1Q6ZNA5 592 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 UBALD2Q8IYN6 164 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 DEPDC4Q8N2C3 294 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF540Q8NDQ6 660 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 OR52P1PQ8NH57 321 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 FAM81AQ8TBF8 368 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 SLC7A13Q8TCU3 470 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF675Q8TD23 568 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 IPCEF1Q8WWN9 437 aaPredicted RBP8.96□□□□□ -0.98
TRIM55-201ENST00000276573 MUL1Q969V5 352 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
TRIM55-201ENST00000276573 CTHRC1Q96CG8 243 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 SDF2Q99470 211 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 DGCR6LQ9BY27 220 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 RAB33BQ9H082 229 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 DUSP15Q9H1R2 295 aaPredicted RBP8.96□□□□□ -0.98
TRIM55-201ENST00000276573 LIN28AQ9H9Z2 209 aaKnown RBP8.96□□□□□ -0.98
TRIM55-201ENST00000276573 MAT2BQ9NZL9 334 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 FTSJ1Q9UET6 329 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 SLC13A4Q9UKG4 626 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 MKLN1Q9UL63 735 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 ZNF232Q9UNY5 417 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 IFT52Q9Y366 437 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 PCDHGA10Q9Y5H3 936 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 TRIOBPQ9H2D6 2365 aa8.96□□□□□ -0.98
TRIM55-201ENST00000276573 IGHV5-51A0A0C4DH38 117 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 HYKKA2RU49 373 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ZAR1LA6NP61 321 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 RHPN2P1A8MT19 583 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 BCAT2O15382 392 aaPredicted RBP8.95□□□□□ -0.98
TRIM55-201ENST00000276573 UGT2B17O75795 530 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 ALOX5P09917 674 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 CT62P0C5K7 136 aa8.95□□□□□ -0.98
TRIM55-201ENST00000276573 RNH1P13489 461 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms