RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 OR8H3Q8N146 312 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 GPR137CQ8N3F9 429 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 OR8K3Q8NH51 312 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF334Q9HCZ1 680 aaPredicted RBP17.99■□□□□ 0.47
PTPRE-201ENST00000254667 LHX3Q9UBR4 397 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 STUB1Q9UNE7 303 aa17.99■□□□□ 0.47
PTPRE-201ENST00000254667 H3BSH0 61 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 H3BUI4 141 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 RBBP9O75884 186 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 PNMTP11086 282 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 SDC1P18827 310 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 PRPS1P60891 318 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 MALLQ13021 153 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 PLEKHN1Q494U1 663 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 OR52E1Q8NGJ3 308 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 RABL2AQ9UBK7 228 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 RABL2BQ9UNT1 228 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 FARSAQ9Y285 508 aaKnown RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 SLC35F4A4IF30 521 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF888P0CJ79 500 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 MYF6P23409 242 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 AOAHP28039 575 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 HOXD9P28356 352 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 AP2S1P53680 142 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 HMGN2P46Q86SG4 172 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 SOX17Q9H6I2 414 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 PAK1IP1Q9NWT1 392 aaPredicted RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 NENFQ9UMX5 172 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 BRINP1O60477 761 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 MTNR1AP48039 350 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 RIPPLY1Q0D2K3 151 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 TDGQ13569 410 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 DEFB110Q30KQ9 67 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 SLC25A25Q6KCM7 469 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 TRUB1Q8WWH5 349 aaKnown RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 VNN3Q9NY84 501 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 ANTXRLA6NF34 631 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 OR52A4PA6NMU1 304 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 STSP08842 583 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 MICAQ29983 383 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 SLC18B1Q6NT16 456 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF619Q8N2I2 560 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 HORMAD2Q8N7B1 307 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 NETO1Q8TDF5 533 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 HAVCR2Q8TDQ0 301 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 INPP5KQ9BT40 448 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 DUSP23Q9BVJ7 150 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 KATNBL1Q9H079 304 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 ALG5Q9Y673 324 aa17.98■□□□□ 0.47
PTPRE-201ENST00000254667 GOLGA4Q13439 2230 aaKnown RBP17.98■□□□□ 0.47
PTPRE-201ENST00000254667 FTCDNL1E5RQL4 147 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 TMX2-CTNND1H3BSU7 103 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 CCR7P32248 378 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 CXCL12P48061 93 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 AFF1P51825 1210 aaKnown RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 TAZQ16635 292 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 XKR5Q6UX68 686 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 NRMQ8IXM6 262 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 OR52E2Q8NGJ4 325 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 TOE1Q96GM8 510 aaKnown RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 C12orf4Q9NQ89 552 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 SMOXQ9NWM0 555 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 TMPRSS11EQ9UL52 423 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 SLC1A7O00341 560 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 PRLP01236 227 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 ADRA1AP35348 466 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 ELOAQ14241 798 aaKnown RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 CARD17Q5XLA6 110 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF584Q8IVC4 421 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 TIGD4Q8IY51 512 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 PRR11Q96HE9 360 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 FAM46AQ96IP4 442 aaKnown RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 NEDD4LQ96PU5 975 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 SORT1Q99523 831 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 FXYD6-FXYD2A0A087WZ82 144 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 H3BQ06 376 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 MRPS14O60783 128 aaKnown RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 GKN3PP0CG01 181 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 FOXK1P85037 733 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 LRFN4Q6PJG9 635 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 OR5T2Q8NGG2 359 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 MAL2Q969L2 176 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 FXYD6Q9H0Q3 95 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 HEBP1Q9NRV9 189 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 A8MVJ9 347 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 HLA-FP30511 346 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 RNF144AP50876 292 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 S100A10P60903 97 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 XKRXQ6PP77 449 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 ASRGL1Q7L266 308 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 VWA5B2Q8N398 1253 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 SLC5A8Q8N695 610 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 ACOT4Q8N9L9 421 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 HOXB13Q92826 284 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-201ENST00000254667 CWH43Q9H720 699 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 HPF1Q9NWY4 346 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 HS3ST2Q9Y278 367 aa17.97■□□□□ 0.47
PTPRE-201ENST00000254667 PRSS38A1L453 326 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 NDUFB2O95178 105 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 GPX3P22352 226 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms