RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SUZ12Q15022 739 aaKnown RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 MRGPREQ86SM8 312 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TCEANCQ8N8B7 351 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 CCL4L1Q8NHW4 92 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 WDR36Q8NI36 951 aaKnown RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TSACCQ96A04 125 aaPredicted RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 OTUB1Q96FW1 271 aaPredicted RBP15.18■□□□□ 0.02
UBE3D-201ENST00000237186 SLC6A18Q96N87 628 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 GPA33Q99795 319 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TRPV5Q9NQA5 729 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 TAS2R16Q9NYV7 291 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 REV3LO60673 3130 aa15.18■□□□□ 0.02
UBE3D-201ENST00000237186 GSAPA4D1B5 854 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 H0Y8X5 98 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 ARHGAP33O14559 1287 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 ALPPP05187 535 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 ZNF888P0CJ79 500 aaPredicted RBP15.17■□□□□ 0.02
UBE3D-201ENST00000237186 DBTP11182 482 aaKnown RBP15.17■□□□□ 0.02
UBE3D-201ENST00000237186 ENDOUP21128 410 aaKnown RBP15.17■□□□□ 0.02
UBE3D-201ENST00000237186 IFNGR2P38484 337 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 BCAP31P51572 246 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 PSMD7P51665 324 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 ZNF91Q05481 1191 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 DLX2Q07687 328 aaPredicted RBP15.17■□□□□ 0.02
UBE3D-201ENST00000237186 MED22Q15528 200 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 ATAD3BQ5T9A4 648 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 GDPGP1Q6ZNW5 385 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 WDR53Q7Z5U6 358 aaPredicted RBP15.17■□□□□ 0.02
UBE3D-201ENST00000237186 IQCHQ86VS3 1027 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 TDHQ8IZJ6 230 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 LRRC25Q8N386 305 aaPredicted RBP15.17■□□□□ 0.02
UBE3D-201ENST00000237186 PROKR2Q8NFJ6 384 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 FCRL4Q96PJ5 515 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 CENPOQ9BU64 300 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 TMEM168Q9H0V1 697 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 DNAJC27Q9NZQ0 273 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 PILRAQ9UKJ1 303 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 CHST2Q9Y4C5 530 aa15.17■□□□□ 0.02
UBE3D-201ENST00000237186 A0A087WUU8 490 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 URADA6NGE7 173 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 CYP7B1O75881 506 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 HSMCR30P0CW71 290 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 ACSL1P33121 698 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 GINS1Q14691 196 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TRAM2Q15035 370 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 SSX1Q16384 188 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TSTQ16762 297 aaKnown RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TRIM16LQ309B1 348 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TBC1D25Q3MII6 688 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 MFSD12Q6NUT3 480 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 CDC73Q6P1J9 531 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 USP53Q70EK8 1073 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 RD3Q7Z3Z2 195 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 NANOGP1Q8N7R0 232 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 ADAMTS15Q8TE58 950 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 DIO2Q92813 273 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 ZG16BQ96DA0 208 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 SLC35A4Q96G79 324 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 OPALINQ96PE5 141 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TSSK6Q9BXA6 273 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 MRPS18AQ9NVS2 196 aaKnown RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 CA5BQ9Y2D0 317 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 HS3ST3A1Q9Y663 406 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 F5P12259 2224 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 AGAP5A6NIR3 686 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 PRKYO43930 277 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TPST2O60704 377 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 CTSVO60911 334 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 HNRNPCP07910 306 aaKnown RBP eCLIP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 UGT2B7P16662 529 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TGM1P22735 817 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 LSM11P83369 360 aaKnown RBP eCLIP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 LTB4RQ15722 352 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 FAM214AQ32MH5 1076 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 FCRL6Q6DN72 434 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 ACSM5Q6NUN0 579 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 OR2L13Q8N349 312 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 CAMKVQ8NCB2 501 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 OR4K14Q8NGD5 310 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 GNPDA2Q8TDQ7 276 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 MS4A4EQ96PG1 132 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 CHCHD6Q9BRQ6 235 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 QRSL1Q9H0R6 528 aaKnown RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 ARMC7Q9H6L4 198 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TRIM45Q9H8W5 580 aaPredicted RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 MTHFD2LQ9H903 347 aaPredicted RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 SIAEQ9HAT2 523 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 HHATLQ9HCP6 504 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 POLMQ9NP87 494 aaPredicted RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TVP23BQ9NYZ1 205 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 PTGFRNQ9P2B2 879 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 TESQ9UGI8 421 aaKnown RBP15.16■□□□□ 0.02
UBE3D-201ENST00000237186 DAPK2Q9UIK4 370 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 UGT2A1Q9Y4X1 527 aa15.16■□□□□ 0.02
UBE3D-201ENST00000237186 MYO10Q9HD67 2058 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 LOC100506127A0A0U1RQW1 187 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 ISPDA4D126 451 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 SAGE2PA6NJ88 616 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 LRRC72A6NJI9 287 aa15.15■□□□□ 0.02
UBE3D-201ENST00000237186 TLX2O43763 284 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms