RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NUP62P37198 522 aaPredicted RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 ATP12AP54707 1039 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 ERVK-21P61565 698 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 SNRPGP62308 76 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 SP140Q13342 867 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 ST3GAL2Q16842 350 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 FAM27D1Q5T7N8 215 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 ZNF687Q8N1G0 1237 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 WDR20Q8TBZ3 569 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 SMG7Q92540 1137 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 OTUB1Q96FW1 271 aaPredicted RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 THSD1Q9NS62 852 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 HRH3Q9Y5N1 445 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 KHNYNO15037 678 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 GATBO75879 557 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 SOD1P00441 154 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 HK1P19367 917 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 PTNP21246 168 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 SNRPD1P62314 119 aaKnown RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 MAP4K2Q12851 820 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 ADAM15Q13444 863 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 PRSS53Q2L4Q9 553 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 PLEKHS1Q5SXH7 462 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 TNFAIP8L2Q6P589 184 aaPredicted RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 OR4D11Q8NGI4 311 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 OR10Z1Q8NGY1 313 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 UFD1Q92890 307 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 C11orf24Q96F05 449 aaPredicted RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 SCLYQ96I15 445 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 LMLNQ96KR4 655 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 ZNF582Q96NG8 517 aaPredicted RBP13.3□□□□□ -0.28
SF1-201ENST00000227503 CLCA2Q9UQC9 943 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 GSTK1Q9Y2Q3 226 aa13.3□□□□□ -0.28
SF1-201ENST00000227503 hCG_1807616A0A1W2PRN6 198 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SLC22A23A1A5C7 686 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SGK494L7N484 410 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 M0R233 179 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SSNA1O43805 119 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 BNIP3LO60238 219 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 CH25HO95992 272 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 DHFRP00374 187 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 IFNA16P05015 189 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 NR2F6P10588 404 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 ATP1B2P14415 290 aaPredicted RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 IRS1P35568 1242 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SPINT3P49223 89 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 AP1S2P56377 157 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 C21orf58P58505 322 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 ERVFC1P60507 584 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SP3Q02447 781 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 HSF2Q03933 536 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 TLE2Q04725 743 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 COX10Q12887 443 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 PIN1Q13526 163 aaPredicted RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 TSTA3Q13630 321 aaPredicted RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 RAB33AQ14088 237 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 GINS1Q14691 196 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 LRRC73Q5JTD7 316 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SFRP5Q5T4F7 317 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 LYPD4Q6UWN0 246 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 ZNF527Q8NB42 609 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 OR4F15Q8NGB8 312 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 NXPE2Q96DL1 559 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 RNFT2Q96EX2 444 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 MED8Q96G25 268 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 DDOQ99489 341 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 NLNQ9BYT8 704 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 GSX2Q9BZM3 304 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 METTL17Q9H7H0 456 aaPredicted RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 BRD7Q9NPI1 651 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 IFT46Q9NQC8 304 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SPATA6Q9NWH7 488 aaPredicted RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 OR6C2Q9NZP2 312 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 CD84Q9UIB8 345 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 ZFR2Q9UPR6 939 aaKnown RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 INSL5Q9Y5Q6 135 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 ELAVL4P26378 380 aaKnown RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 BMP8BP34820 402 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 RPL35P42766 123 aaKnown RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 TPMTP51580 245 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 EPHB3P54753 998 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 KIAA1024LP59773 190 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
SF1-201ENST00000227503 LIPJQ5W064 366 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 BICRALQ6AI39 1079 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 RASSF6Q6ZTQ3 369 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 HTR3DQ70Z44 454 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 BMP8AQ7Z5Y6 402 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 UBE2Q1Q7Z7E8 422 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 OR8J1Q8NGP2 316 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 COQ8AQ8NI60 647 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 RAB8BQ92930 207 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 SCMH1Q96GD3 660 aa13.29□□□□□ -0.28
SF1-201ENST00000227503 RADILQ96JH8 1075 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms