RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 FAAHO00519 579 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 BSGP35613 385 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 PIP5KL1Q5T9C9 394 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 THOC7Q6I9Y2 204 aaKnown RBP13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CADM2Q8N3J6 435 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 WACQ9BTA9 647 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CCDC32Q9BV29 185 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 ITGB1BP2Q9UKP3 347 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CACNA1IQ9P0X4 2223 aa13.26□□□□□ -0.29
COL6A1-207ENST00000612273 CHD9Q3L8U1 2897 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 LOC102723532A0A0G2JNH3 316 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 FAM170BA6NMN3 283 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 FAM25AB3EWG3 89 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 FAM25CB3EWG5 89 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 FAM25GB3EWG6 89 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 SPINT1O43278 529 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 CXCL10P02778 98 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 CHRM4P08173 479 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 KIR2DL3P43628 341 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 PXNP49023 591 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-207ENST00000612273 LIMK1P53667 647 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 FABP5Q01469 135 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 DUSP2Q05923 314 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 Q5BKY6 102 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 DDI2Q5TDH0 399 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 TRIQKQ629K1 86 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 C18orf63Q68DL7 685 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 PLET1Q6UQ28 207 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 FAM129CQ86XR2 697 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 RASGRP3Q8IV61 690 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 C19orf18Q8NEA5 215 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 KATNB1Q9BVA0 655 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF717Q9BY31 904 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-207ENST00000612273 SAP130Q9H0E3 1048 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 SLC9A8Q9Y2E8 581 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 TRIOO75962 3097 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 SPTBP11277 2137 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 IGLON5A6NGN9 336 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 NDUFS4O43181 175 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 LILRB5O75023 590 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 GNSP15586 552 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 CTBP2P56545 445 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 LRRC32Q14392 662 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 HSDL2Q6YN16 418 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 PRICKLE2Q7Z3G6 844 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 HOMEZQ8IX15 550 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 OR4N5Q8IXE1 308 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 LRRC56Q8IYG6 542 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-207ENST00000612273 ZNF557Q8N988 423 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-207ENST00000612273 SIMC1Q8NDZ2 872 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 PROKR2Q8NFJ6 384 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 TEX47Q8TBZ9 253 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 CREB3L4Q8TEY5 395 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 C12orf66Q96MD2 445 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 MS4A8Q9BY19 250 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 MED20Q9H944 212 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 MOV10Q9HCE1 1003 aaKnown RBP13.25□□□□□ -0.29
COL6A1-207ENST00000612273 LHX9Q9NQ69 397 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 TRPV5Q9NQA5 729 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 P2RX2Q9UBL9 471 aa13.25□□□□□ -0.29
COL6A1-207ENST00000612273 PLEKHB1Q9UF11 243 aaPredicted RBP13.25□□□□□ -0.29
COL6A1-207ENST00000612273 A0A087WUU8 490 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 KIAA0355O15063 1070 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 NARSO43776 548 aaKnown RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 MOSPD3O75425 235 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 RAB36O95755 333 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 PAK4O96013 591 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SOX9P48436 509 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 HYAL2Q12891 473 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 LTB4RQ15722 352 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ARHGAP15Q53QZ3 475 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 CNIH2Q6PI25 160 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 KIF18BQ86Y91 864 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 MARCH9Q86YJ5 346 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 Q8N402 240 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 OR8D4Q8NGM9 314 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 LILRB4Q8NHJ6 448 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 UBE2E3Q969T4 207 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 C19orf43Q9BQ61 176 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 C6orf106Q9H6K1 298 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 RPRD1BQ9NQG5 326 aaKnown RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 NDUFB11Q9NX14 153 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SAGE1Q9NXZ1 904 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 KCND3Q9UK17 655 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 A0A0B4J293 547 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 A0A1W2PPK0 400 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 TBC1D3BA6NDS4 549 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 PLOD3O60568 738 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 SLC2A2P11168 524 aaPredicted RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ADRB3P13945 408 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 CEBPBP17676 345 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 MTNR1AP48039 350 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 STXBP1P61764 594 aaKnown RBP13.24□□□□□ -0.29
COL6A1-207ENST00000612273 ID2Q02363 134 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 FCRLBQ6BAA4 426 aa13.24□□□□□ -0.29
COL6A1-207ENST00000612273 NUDT13Q86X67 352 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms