RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 TAS2R41P59536 307 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 LHX8Q68G74 356 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 TTC23LQ6PF05 361 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 CCDC149Q6ZUS6 474 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 CAMKMTQ7Z624 323 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 NEIL3Q8TAT5 605 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 TM4SF18Q96CE8 201 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 CLIP3Q96DZ5 547 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 FCRL4Q96PJ5 515 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SAP130Q9H0E3 1048 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 MYNNQ9NPC7 610 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 IL36AQ9UHA7 158 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 GNSP15586 552 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SYN1P17600 705 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SRP9P49458 86 aaKnown RBP19.26■□□□□ 0.67
SSBP3-216ENST00000610401 WNT4P56705 351 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SREBF2Q12772 1141 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 MLLT11Q13015 90 aaPredicted RBP19.26■□□□□ 0.67
SSBP3-216ENST00000610401 TCEAL5Q5H9L2 206 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 HSDL2Q6YN16 418 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 PRICKLE2Q7Z3G6 844 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 KIF18BQ86Y91 864 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 OR6C4Q8NGE1 309 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 MAT2BQ9NZL9 334 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 SLC23A2Q9UGH3 650 aa19.26■□□□□ 0.67
SSBP3-216ENST00000610401 GPR55Q9Y2T6 319 aaPredicted RBP19.26■□□□□ 0.67
SSBP3-216ENST00000610401 GTPBP1O00178 669 aaKnown RBP19.25■□□□□ 0.67
SSBP3-216ENST00000610401 MTNR1AP48039 350 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 KIAA0100Q14667 2235 aaKnown RBP19.25■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF730Q6ZMV8 503 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 VRK2Q86Y07 508 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF547Q8IVP9 402 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 OR51G2Q8NGK0 314 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 OR8D4Q8NGM9 314 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF354BQ96LW1 612 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 BBS4Q96RK4 519 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF607Q96SK3 696 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 KLHL42Q9P2K6 505 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 SCO2O43819 266 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 PAHP00439 452 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 SSR2P43308 183 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 RAB33AQ14088 237 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 KLHL12Q53G59 568 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 TMEM107Q6UX40 140 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 SYT9Q86SS6 491 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 TMEM145Q8NBT3 493 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 PLA2G15Q8NCC3 412 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 BEST4Q8NFU0 473 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 ENOPH1Q9UHY7 261 aa19.25■□□□□ 0.67
SSBP3-216ENST00000610401 ZFR2Q9UPR6 939 aaKnown RBP19.25■□□□□ 0.67
SSBP3-216ENST00000610401 LCMT2O60294 686 aaKnown RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 MRPL3P09001 348 aaKnown RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 ACRP10323 421 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 PXNP49023 591 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 SMUG1Q53HV7 270 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 XKRXQ6PP77 449 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 C17orf64Q86WR6 236 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 OR4M2Q8NGB6 313 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 OR8H1Q8NGG4 311 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 GOT1L1Q8NHS2 421 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 UFD1Q92890 307 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 IRF7Q92985 503 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 CPEB1Q9BZB8 566 aaKnown RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 HMX1Q9NP08 348 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 ZNF222Q9UK12 451 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 A0A1W2PQ72 361 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 FAM170BA6NMN3 283 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 FAAHO00519 579 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 LANCL1O43813 399 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 DPM1O60762 260 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 TBX6O95947 436 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 AMIGO1Q86WK6 493 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 TMC8Q8IU68 726 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 SLC37A3Q8NCC5 494 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 ANKK1Q8NFD2 765 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 TEX47Q8TBZ9 253 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 ISG20L2Q9H9L3 353 aaKnown RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 PTGFRNQ9P2B2 879 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 IRAK3Q9Y616 596 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 MN1Q10571 1320 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 OR2B3O76000 313 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 DDCP20711 480 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 KCNJ5P48544 419 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 CDH11P55287 796 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 GNG2P59768 71 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 FAPQ12884 760 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 BCL2L15Q5TBC7 163 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 ELMOD2Q8IZ81 293 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 GRPEL2Q8TAA5 225 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 TFGQ92734 400 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 SENP5Q96HI0 755 aaPredicted RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 RNF170Q96K19 258 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 SLC35G5Q96KT7 338 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 SECISBP2Q96T21 854 aaKnown RBP19.24■□□□□ 0.67
SSBP3-216ENST00000610401 GSTK1Q9Y2Q3 226 aa19.24■□□□□ 0.67
SSBP3-216ENST00000610401 PLXNB3Q9ULL4 1909 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 PITPNM1O00562 1244 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 PGRMC2O15173 223 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 LYRM1O43325 122 aa19.23■□□□□ 0.67
SSBP3-216ENST00000610401 AHRP35869 848 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms