RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CPPED1Q9BRF8 314 aaPredicted RBP19■□□□□ 0.63
PNKP-215ENST00000600910 GPATCH1Q9BRR8 931 aaKnown RBP19■□□□□ 0.63
PNKP-215ENST00000600910 IKZF5Q9H5V7 419 aa19■□□□□ 0.63
PNKP-215ENST00000600910 NANOGQ9H9S0 305 aa19■□□□□ 0.63
PNKP-215ENST00000600910 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19■□□□□ 0.63
PNKP-215ENST00000600910 DTX4Q9Y2E6 619 aa19■□□□□ 0.63
PNKP-215ENST00000600910 HEMK1Q9Y5R4 338 aaPredicted RBP19■□□□□ 0.63
PNKP-215ENST00000600910 ACACAQ13085 2346 aa19■□□□□ 0.63
PNKP-215ENST00000600910 TRBV11-1A0A0K0K1C0 115 aa19■□□□□ 0.63
PNKP-215ENST00000600910 ICAM2P13598 275 aa19■□□□□ 0.63
PNKP-215ENST00000600910 CLCN2P51788 898 aa19■□□□□ 0.63
PNKP-215ENST00000600910 MTPNP58546 118 aa19■□□□□ 0.63
PNKP-215ENST00000600910 RPS26P62854 115 aaKnown RBP19■□□□□ 0.63
PNKP-215ENST00000600910 Q0VFX4 171 aa19■□□□□ 0.63
PNKP-215ENST00000600910 ZNF155Q12901 538 aaPredicted RBP19■□□□□ 0.63
PNKP-215ENST00000600910 DCAF10Q5QP82 559 aa19■□□□□ 0.63
PNKP-215ENST00000600910 MFSD12Q6NUT3 480 aa19■□□□□ 0.63
PNKP-215ENST00000600910 WDR53Q7Z5U6 358 aaPredicted RBP19■□□□□ 0.63
PNKP-215ENST00000600910 C16orf58Q96GQ5 468 aa19■□□□□ 0.63
PNKP-215ENST00000600910 FER1L6-AS2Q96M78 137 aa19■□□□□ 0.63
PNKP-215ENST00000600910 HOPXQ9BPY8 73 aaPredicted RBP19■□□□□ 0.63
PNKP-215ENST00000600910 YIPF4Q9BSR8 244 aa19■□□□□ 0.63
PNKP-215ENST00000600910 FOLH1BQ9HBA9 442 aa19■□□□□ 0.63
PNKP-215ENST00000600910 MMP25Q9NPA2 562 aa19■□□□□ 0.63
PNKP-215ENST00000600910 PRODH2Q9UF12 536 aa19■□□□□ 0.63
PNKP-215ENST00000600910 LAMA5O15230 3695 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 OR6C76A6NM76 312 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 PPIBP23284 216 aaKnown RBP18.99■□□□□ 0.63
PNKP-215ENST00000600910 SLC6A2P23975 617 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 CPOXP36551 454 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 VAC14Q08AM6 782 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 SELPLGQ14242 412 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 RABL3Q5HYI8 236 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 COX20Q5RI15 118 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.99■□□□□ 0.63
PNKP-215ENST00000600910 HSDL2Q6YN16 418 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 CCDC81Q6ZN84 652 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 SLC29A4Q7RTT9 530 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 ZSCAN1Q8NBB4 408 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 OR8J3Q8NGG0 315 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 FBXO30Q8TB52 745 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 VSTM2LQ96N03 204 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 THUMPD3Q9BV44 507 aaKnown RBP18.99■□□□□ 0.63
PNKP-215ENST00000600910 SERHL2Q9H4I8 314 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 CFL2Q9Y281 166 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 GMEB1Q9Y692 573 aa18.99■□□□□ 0.63
PNKP-215ENST00000600910 EVPLLA8MZ36 301 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 PRKNO60260 465 aaPredicted RBP18.98■□□□□ 0.63
PNKP-215ENST00000600910 MATN1P21941 496 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 PRIM2P49643 509 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 MVDP53602 400 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 PSME3P61289 254 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 RNF4P78317 190 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 TLE3Q04726 772 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 MYBPC3Q14896 1274 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 EBPQ15125 230 aaKnown RBP18.98■□□□□ 0.63
PNKP-215ENST00000600910 C16orf89Q6UX73 402 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 LRRC69Q6ZNQ3 347 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 GPR155Q7Z3F1 870 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 PROSER1Q86XN7 944 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 PGAM4Q8N0Y7 254 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 OR52N2Q8NGI0 321 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 ZCCHC14Q8WYQ9 949 aaKnown RBP18.98■□□□□ 0.63
PNKP-215ENST00000600910 JADE3Q92613 823 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 SLC7A6OSQ96CW6 309 aaPredicted RBP18.98■□□□□ 0.63
PNKP-215ENST00000600910 OTUB1Q96FW1 271 aaPredicted RBP18.98■□□□□ 0.63
PNKP-215ENST00000600910 GAL3ST4Q96RP7 486 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 ITPAQ9BY32 194 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 ACTRT3Q9BYD9 372 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 C1orf21Q9H246 121 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 NDE1Q9NXR1 346 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 TAS2R1Q9NYW7 299 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 FAF1Q9UNN5 650 aaPredicted RBP18.98■□□□□ 0.63
PNKP-215ENST00000600910 POLHQ9Y253 713 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 IGF2RP11717 2491 aa18.98■□□□□ 0.63
PNKP-215ENST00000600910 C2orf92A0A1B0GVN3 265 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 ARGFXA6NJG6 315 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 TAF4O00268 1085 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 ATP5HO75947 161 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 CRATP43155 626 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 RGNQ15493 299 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 BROXQ5VW32 411 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 CDC73Q6P1J9 531 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 TNFAIP8L2Q6P589 184 aaPredicted RBP18.97■□□□□ 0.63
PNKP-215ENST00000600910 KBTBD2Q8IY47 623 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 DEFB107AQ8IZN7 70 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 CDRT4Q8N9R6 151 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 SLC16A11Q8NCK7 471 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 OR5D16Q8NGK9 328 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 SLC9A6Q92581 669 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 SH3GL1Q99961 368 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 WWTR1Q9GZV5 400 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 OR51I1Q9H343 314 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 CORO2BQ9UQ03 480 aa18.97■□□□□ 0.63
PNKP-215ENST00000600910 C15orf38-AP3S2A0A0A6YYH1 394 aa18.96■□□□□ 0.63
PNKP-215ENST00000600910 HNRNPCL1O60812 293 aaKnown RBP18.96■□□□□ 0.63
PNKP-215ENST00000600910 ZFAND5O76080 213 aa18.96■□□□□ 0.63
PNKP-215ENST00000600910 SERPINA7P05543 415 aa18.96■□□□□ 0.63
PNKP-215ENST00000600910 ITGAMP11215 1152 aa18.96■□□□□ 0.63
PNKP-215ENST00000600910 GPX2P18283 190 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms