RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ZNF397Q8NF99 534 aaPredicted RBP3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 BIRC7Q96CA5 298 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 NTNG2Q96CW9 530 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 CCDC51Q96ER9 411 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 KCNK16Q96T55 309 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 APOOQ9BUR5 198 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 GPR174Q9BXC1 333 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 RAB11FIP5Q9BXF6 653 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 BCAP29Q9UHQ4 241 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 MRPL11Q9Y3B7 192 aaKnown RBP3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 FKBP7Q9Y680 259 aa3.72□□□□□ -1.81
SMCHD1-205ENST00000581383 MCF2LO15068 1137 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 BUB1O43683 1085 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 B3GALNT1O75752 331 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 STK17BO94768 372 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ECDO95905 644 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 RENP00797 406 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 PDGFBP01127 241 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 RALAP11233 206 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 GP9P14770 177 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ARF4P18085 180 aaPredicted RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 FUT1P19526 365 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 SAA4P35542 130 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ASMTP46597 345 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 VCPP55072 806 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 NOP14P78316 857 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 FUT7Q11130 342 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 CNPY1Q3B7I2 92 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ZNF506Q5JVG8 444 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 SUMF1Q8NBK3 374 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 FAM71CQ8NEG0 241 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ANKRD20A12PQ8NF67 263 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 OR4F17Q8NGA8 305 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 OR2L2Q8NH16 312 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 OR52J3Q8NH60 311 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 WDR36Q8NI36 951 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 DQX1Q8TE96 717 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 LHX4Q969G2 390 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 TOMM40LQ969M1 308 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 C14orf79Q96F83 325 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 OR4F4Q96R69 305 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 PUS3Q9BZE2 481 aaKnown RBP3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 NMNAT2Q9BZQ4 307 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ABCC13Q9NSE7 274 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 ACTR3BQ9P1U1 418 aa3.71□□□□□ -1.82
SMCHD1-205ENST00000581383 FOXI3A8MTJ6 420 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 H3BMH7 237 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 PHF1O43189 567 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 PDE5AO76074 875 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 GOT2P00505 430 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 MELTFP08582 738 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 TSPAN8P19075 237 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 IL4RP24394 825 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 DNAJB1P25685 340 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 SLC8A3P57103 927 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 DSCR10P59022 87 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 HAND2P61296 217 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 LMO4P61968 165 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 NAAAQ02083 359 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ZFP36L1Q07352 338 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 SMC1AQ14683 1233 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ABRAXAS2Q15018 415 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 CD226Q15762 336 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ZSWIM7Q19AV6 140 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 PARP6Q2NL67 630 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 VWA2Q5GFL6 755 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 NHLRC3Q5JS37 347 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ACER2Q5QJU3 275 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 SEL1L2Q5TEA6 688 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 TAF3Q5VWG9 929 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ADAMTSL5Q6ZMM2 481 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 RANBP3LQ86VV4 465 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 POM121L12Q8N7R1 296 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 MINDY2Q8NBR6 621 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ZNF671Q8TAW3 534 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 FAM222BQ8WU58 562 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ITLN1Q8WWA0 313 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 NCLNQ969V3 563 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 RBM18Q96H35 190 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 PSMB7Q99436 277 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 C19orf43Q9BQ61 176 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 TTYH2Q9BSA4 534 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 PNNQ9H307 717 aaKnown RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ROPN1Q9HAT0 212 aaPredicted RBP3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ESM1Q9NQ30 184 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 YAE1D1Q9NRH1 226 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 STARD5Q9NSY2 213 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 GDAP2Q9NXN4 497 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 FZR1Q9UM11 496 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 ABCC4O15439 1325 aa3.7□□□□□ -1.82
SMCHD1-205ENST00000581383 NPIPA5A0A0B4J1W7 369 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 SRRM5B3KS81 715 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 C19orf81C9J6K1 198 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 NPIPA5E9PKD4 350 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 LGALS8O00214 317 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 LRRTM2O43300 516 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 VENTXO95231 258 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 NUDT14O95848 222 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 IGSF6O95976 241 aa3.69□□□□□ -1.82
SMCHD1-205ENST00000581383 AZU1P20160 251 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms