RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 GLIPR2Q9H4G4 154 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 FGFR1OP2Q9NVK5 253 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 STMN3Q9NZ72 180 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 SH3BP4Q9P0V3 963 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 NTMQ9P121 344 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 KLHL14Q9P2G3 628 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 TRIM33Q9UPN9 1127 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ERVK-19Q9WJR5 959 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 MYO9AB2RTY4 2548 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ESPL1Q14674 2120 aa9.17□□□□□ -0.94
GGA3-209ENST00000580646 ANKRD17O75179 2603 aaKnown RBP9.17□□□□□ -0.94
GGA3-209ENST00000580646 MYOCOSA0A1B0GUC4 107 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 OR5H15A6NDH6 313 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 RNASET2O00584 256 aaKnown RBP9.16□□□□□ -0.94
GGA3-209ENST00000580646 AKAP10O43572 662 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 PRAMEF2O60811 474 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 CT62P0C5K7 136 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 GP1BBP13224 206 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 SOX18P35713 384 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 NCBP2P52298 156 aaKnown RBP eCLIP9.16□□□□□ -0.94
GGA3-209ENST00000580646 DCAF7P61962 342 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 RNF4P78317 190 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 RPS6KA2Q15349 733 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 ZNF750Q32MQ0 723 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 ACER2Q5QJU3 275 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 MSANTD1Q6ZTZ1 278 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 SLC29A4Q7RTT9 530 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 RPS19BP1Q86WX3 136 aaKnown RBP9.16□□□□□ -0.94
GGA3-209ENST00000580646 C9orf40Q8IXQ3 194 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 OR2L13Q8N349 312 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 SLC15A4Q8N697 577 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 KRTCAP2Q8N6L1 136 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 ZNF615Q8N8J6 731 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 ST6GALNAC3Q8NDV1 305 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 OR7A2PQ8NGA2 310 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 SSC4DQ8WTU2 575 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 TP53INP1Q96A56 240 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 DUSP26Q9BV47 211 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 OR10A5Q9H207 317 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 TRIM45Q9H8W5 580 aaPredicted RBP9.16□□□□□ -0.94
GGA3-209ENST00000580646 NEUROD4Q9HD90 331 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 NPHS2Q9NP85 383 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 ABI3Q9P2A4 366 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 MYOTQ9UBF9 498 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 PRODH2Q9UF12 536 aa9.16□□□□□ -0.94
GGA3-209ENST00000580646 USP9YO00507 2555 aaPredicted RBP9.16□□□□□ -0.94
GGA3-209ENST00000580646 EML6Q6ZMW3 1958 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 A0A0G2JND7 137 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 A0A1W2PRB8 838 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 TMEM200CA6NKL6 621 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 E9PBE3 544 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 HRKO00198 91 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 FCHO1O14526 889 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 SLC22A3O75751 556 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 PSMG1O95456 288 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 CBX7O95931 251 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 IL6P05231 212 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 LAMP1P11279 417 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 EDN3P14138 238 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 LSP1P33241 339 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 TRHRP34981 398 aaPredicted RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 KIR3DL1P43629 444 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 RPS6KA3P51812 740 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 MANFP55145 182 aaKnown RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 MLF1P58340 268 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 STX1BP61266 288 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 EBPQ15125 230 aaKnown RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 WLSQ5T9L3 541 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ANXA8L1Q5VT79 327 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 TMEM198Q66K66 360 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 FCRLBQ6BAA4 426 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ANKRD26P1Q6NSI1 321 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 CGB2Q6NT52 195 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 FAM180BQ6P0A1 224 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 FAM111BQ6SJ93 734 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 FAM180AQ6UWF9 173 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 TMEM64Q6YI46 380 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 GPALPP1Q8IXQ4 340 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 DND1Q8IYX4 353 aaKnown RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 MIER2Q8N344 545 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 KIF2BQ8N4N8 673 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 BCORP1Q8N888 145 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ZNF321PQ8N8H1 164 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ZNF441Q8N8Z8 693 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 DRAXINQ8NBI3 349 aaPredicted RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 VPS37AQ8NEZ2 397 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 OR9A2Q8NGT5 310 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 RFWD2Q8NHY2 731 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 OR5P2Q8WZ92 322 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 CIDECQ96AQ7 238 aaPredicted RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 MOAP1Q96BY2 351 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ELP4Q96EB1 424 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 TAAR6Q96RI8 345 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ZBTB18Q99592 522 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 NPAS2Q99743 824 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 NSRP1Q9H0G5 558 aaKnown RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 RABEP2Q9H5N1 569 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 ZNF385DQ9H6B1 395 aa9.15□□□□□ -0.94
GGA3-209ENST00000580646 FAM120CQ9NX05 1096 aaKnown RBP9.15□□□□□ -0.94
GGA3-209ENST00000580646 TAS2R9Q9NYW1 312 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms