RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PRDM7Q9NQW5 492 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 C1GALT1Q9NS00 363 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 SEMA3GQ9NS98 782 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 ACSS1Q9NUB1 689 aaPredicted RBP9.52□□□□□ -0.89
SS18-207ENST00000577636 CCM2LQ9NUG4 571 aaPredicted RBP9.52□□□□□ -0.89
SS18-207ENST00000577636 IRAK4Q9NWZ3 460 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 TAS2R7Q9NYW3 318 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 GPN3Q9UHW5 284 aaPredicted RBP9.52□□□□□ -0.89
SS18-207ENST00000577636 SERTAD3Q9UJW9 196 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 RPS6KA6Q9UK32 745 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 UTS2RQ9UKP6 389 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 FBXW2Q9UKT8 454 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 SAMD4AQ9UPU9 718 aaKnown RBP9.52□□□□□ -0.89
SS18-207ENST00000577636 NTNG1Q9Y2I2 539 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 C15orf41Q9Y2V0 281 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 SNX8Q9Y5X2 465 aa9.52□□□□□ -0.89
SS18-207ENST00000577636 TEP1Q99973 2627 aaKnown RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 PRSS44E7EML9 344 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 H0YGG7 62 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CASQ2O14958 399 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 ZNF749O43361 778 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 TMPRSS11DO60235 418 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 SRPX2O60687 465 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 ZG16O60844 167 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CTSVO60911 334 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ALPPP05187 535 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 NR2F6P10588 404 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 PVRP15151 417 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ALOX12P18054 663 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 GPX2P18283 190 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 EFNA1P20827 205 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 CPN2P22792 545 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CERS1P27544 350 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 PTPN6P29350 595 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 MPIP34949 423 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 RORAP35398 523 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 HSPA13P48723 471 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 VSX2P58304 361 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 ARF3P61204 181 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 HBA1P69905 142 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 RBBP4Q09028 425 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 HYAL2Q12891 473 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 FADDQ13158 208 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 VEZF1Q14119 521 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 NCF4Q15080 339 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ZNF385BQ569K4 471 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 INTS11Q5TA45 600 aaKnown RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 C1orf189Q5VU69 101 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 FAM198BQ6UWH4 519 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 FKBP9P1Q75LS8 142 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 VN1R4Q7Z5H5 301 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CALHM3Q86XJ0 350 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CARFQ8N187 725 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 GALNT16Q8N428 558 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 KCT2Q8NC54 265 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ADCY4Q8NFM4 1077 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 OR52E4Q8NGH9 312 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 OR52N2Q8NGI0 321 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ZCCHC10Q8TBK6 192 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ZFP90Q8TF47 636 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CANT1Q8WVQ1 401 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 CIDECQ96AQ7 238 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 EME1Q96AY2 570 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 MOAP1Q96BY2 351 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ZNF184Q99676 751 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 Q9H521 79 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 ZNF552Q9H707 407 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 ZBTB20Q9HC78 741 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 SLC35C2Q9NQQ7 365 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 PRDM9Q9NQV7 894 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 AGPAT4Q9NRZ5 378 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 SLC6A13Q9NSD5 602 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 TEX10Q9NXF1 929 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 THUMPD1Q9NXG2 353 aaKnown RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 ITGB1BP2Q9UKP3 347 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 BAG5Q9UL15 447 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 FAF1Q9UNN5 650 aaPredicted RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 EXO1Q9UQ84 846 aaKnown RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 PADI2Q9Y2J8 665 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 PTRH2Q9Y3E5 179 aaKnown RBP9.51□□□□□ -0.89
SS18-207ENST00000577636 DTNAQ9Y4J8 743 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 GMEB1Q9Y692 573 aa9.51□□□□□ -0.89
SS18-207ENST00000577636 RNF103-CHMP3A0A140T963 221 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 ERAL1O75616 437 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 KLHL18O94889 574 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 IFNA14P01570 189 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 RAP2AP10114 183 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 ACADSP16219 412 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 HOXB9P17482 250 aaPredicted RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 CSNK2A2P19784 350 aaPredicted RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 GRNP28799 593 aaKnown RBP9.5□□□□□ -0.89
SS18-207ENST00000577636 MAGEA8P43361 318 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 NCBP2P52298 156 aaKnown RBP eCLIP9.5□□□□□ -0.891e-8■■■□□ 16.9
SS18-207ENST00000577636 PER3P56645 1201 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 RIPPLY3P57055 190 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 FOXL2P58012 376 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 SSPNQ14714 243 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 MYBPC3Q14896 1274 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 MLC1Q15049 377 aa9.5□□□□□ -0.89
SS18-207ENST00000577636 RGNQ15493 299 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms