RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 TCTN3Q6NUS6 607 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 TRPM8Q7Z2W7 1104 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 RPS19BP1Q86WX3 136 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 LGI4Q8N135 537 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 CLEC4FQ8N1N0 589 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 GOT1L1Q8NHS2 421 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 ZNF721Q8TF20 911 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 LMF1Q96S06 567 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 SMAD5Q99717 465 aaKnown RBP11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 NPAS2Q99743 824 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 OR10A5Q9H207 317 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 CDCP1Q9H5V8 836 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 IL1RL2Q9HB29 575 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 SIRT3Q9NTG7 399 aaPredicted RBP11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 ARL8BQ9NVJ2 186 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 SLAMF8Q9P0V8 285 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 MAP10Q9P2G4 905 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 PRODH2Q9UF12 536 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 ZNF639Q9UID6 485 aa11.98□□□□□ -0.49
NPLOC4-214ENST00000573876 CCT8L1PA6NM43 557 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 UPK1AO00322 258 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 AIM2O14862 343 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 EMC8O43402 210 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PLOD3O60568 738 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PRAMEF2O60811 474 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 NME6O75414 186 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 KCNH1O95259 989 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 UQCRC2P22695 453 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 SOAT1P35610 550 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 SOX11P35716 441 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 SLC37A1P57057 533 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 RNF4P78317 190 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 MFAP5Q13361 173 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 KRT72Q14CN4 511 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 ACER2Q5QJU3 275 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 FHL5Q5TD97 284 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 B3GNTL1Q67FW5 361 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 FCRLBQ6BAA4 426 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 H3F3CQ6NXT2 135 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 LINC00696Q6ZRV3 163 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 SZRD1Q7Z422 152 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 RETREG3Q86VR2 466 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 ZADH2Q8N4Q0 377 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 LSM14AQ8ND56 463 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 NUP43Q8NFH3 380 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 OR52R1Q8NGF1 315 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 OR5AK3PQ8NH89 298 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PSMA8Q8TAA3 256 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 THAP3Q8WTV1 239 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PSMF1Q92530 271 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 FAM120BQ96EK7 910 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 NSL1Q96IY1 281 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 TRIM4Q9C037 500 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PAIP1Q9H074 479 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 EFCAB1Q9HAE3 211 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 SLC6A13Q9NSD5 602 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 DDX18Q9NVP1 670 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 STMN3Q9NZ72 180 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 TAGLN3Q9UI15 199 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 VPS4AQ9UN37 437 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 C19orf53Q9UNZ5 99 aaPredicted RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PCDHB14Q9Y5E9 798 aa11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 PRRC2CQ9Y520 2896 aaKnown RBP11.97□□□□□ -0.49
NPLOC4-214ENST00000573876 A0A087WV62 115 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 A0A096LPI6 279 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 CDK2AP1O14519 115 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 MRASO14807 208 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 DPM1O60762 260 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 COQ9O75208 318 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ERN1O75460 977 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 CBX7O95931 251 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 IFI6P09912 130 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ESRRAP11474 423 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 PRDX6P30041 224 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 CASRP41180 1078 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 MLF1P58340 268 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 NFYCQ13952 458 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 FAM91A1Q658Y4 838 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 REP15Q6BDI9 236 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 DLEU7Q6UYE1 221 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 DNAJC14Q6Y2X3 702 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ASB18Q6ZVZ8 466 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 C6orf120Q7Z4R8 191 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 OR2L13Q8N349 312 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 DPP10Q8N608 796 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 TRIML2Q8N7C3 387 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ZNF615Q8N8J6 731 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 EXD3Q8N9H8 876 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 PCYOX1LQ8NBM8 494 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 NUBPLQ8TB37 319 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 RCN3Q96D15 328 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 GAL3ST4Q96RP7 486 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 SLC25A18Q9H1K4 315 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 NEUROD4Q9HD90 331 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ZNF71Q9NQZ8 489 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ZCCHC3Q9NUD5 404 aaKnown RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 ZNF223Q9UK11 482 aaPredicted RBP11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 TP53TG5Q9Y2B4 290 aa11.96□□□□□ -0.49
NPLOC4-214ENST00000573876 YARS2Q9Y2Z4 477 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms